KEGG   Rattus norvegicus (rat): 365755
Entry
365755            CDS       T01003                                 
Symbol
Tbl1xr1
Name
(RefSeq) F-box-like/WD repeat-containing protein TBL1XR1
  KO
K04508  transducin (beta)-like 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    365755 (Tbl1xr1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    365755 (Tbl1xr1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    SMART complex
     365755 (Tbl1xr1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 eIF2A LisH RMC1_N WD40_like Coatomer_WDAD PD40 K_channel_TID
Other DBs
NCBI-GeneID: 365755
NCBI-ProteinID: NP_001102411
RGD: 1560053
Ensembl: ENSRNOG00000011216
UniProt: A6IHE1 D3ZNF4
Position
2:106718811..106857989
AA seq 514 aa
MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQHAAAAAAAAAATNQ
QGSAKNGENTANGEENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV
SDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLL
ATGSYDGFARIWTKDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEA
KQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPT
GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASF
DSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY
RGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgagtataagcagtgatgaggtcaacttcttggtatataggtacttgcaagagtcagga
ttttctcattctgcatttacctttggtatagagagccatataagtcagtccaacataaat
ggtgccctcgtcccacccgctgcactcatctctatcatccagaaaggcctgcaatatgta
gaggcagaagttagcataaatgaggatggcaccttatttgatggtcgacccatagagtct
ctgtccctgatagatgctgtcatgcccgatgtcgtccaaacaagacaacaagcctacaga
gacaagcttgcacagcaacatgcagccgctgctgcagctgctgccgcagccactaaccag
caaggctctgcgaaaaatggagagaacacagccaatggggaggagaatggagcacacacc
atcgcaaataatcacacggacatgatggaggtggacggggatgtggaaatccctcccaat
aaagcggttgtgcttcggggccatgaatcggaagttttcatctgtgcctggaaccctgtt
agtgatctcctggcatcagggtctggagactccactgcaagaatatggaacctcagtgag
aacagcacaagtggccccacacagctggtgcttagacactgcatacgggaaggagggcag
gacgttcccagtaacaaggatgtcacctctctagattggaatagtgaaggtacacttcta
gcaactgggtcatatgacggatttgccagaatatggactaaagatggtaatcttgccagc
accttggggcagcataaaggtcctatatttgcattaaaatggaataagaaaggaaatttc
atcctaagtgctggtgtagacaagaccaccatcatttgggatgcgcatactggagaagcc
aagcagcagtttcctttccattcagccccagcactggatgttgactggcagagcaacaac
acctttgcatcttgtagtacagatatgtgcattcacgtctgcaaattaggacaagacaga
cctatcaaaacattccagggacacacgaatgaagtaaatgctatcaaatgggacccaact
ggcaatctcctagcctcctgttcagatgacatgacattgaagatatggagtatgaagcaa
gataactgtgttcatgatttacaagcacataataaagaaatttatactattaaatggagt
ccaacaggaccagggacaaataatccgaatgccaaccttatgctagcaagtgcatccttt
gattctacagttaggttatgggatgtagaccgagggatttgcatccatactttgacaaaa
catcaagagcctgtgtacagtgtggcttttagtcctgatggcaggtatctggcaagtggt
tcttttgacaagtgtgtgcacatctggaacacacagacaggtgctctagttcacagttac
aggggaacaggtgggatttttgaagtttgctggaacgcagcaggagacaaagttggagcc
agtgcttcggatggttcagtttgtgtcttagatcttcggaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (40)   

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