KEGG   Rattus norvegicus (rat): 365844
Entry
365844            CDS       T01003                                 
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
  KO
K14314  nuclear pore complex protein Nup210
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    365844 (Nup210l)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    365844 (Nup210l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    365844 (Nup210l)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     365844 (Nup210l)
SSDB
Motif
Pfam: Big_2 T2SS-T3SS_pil_N HupF_HypC
Other DBs
NCBI-GeneID: 365844
NCBI-ProteinID: NP_001178829
RGD: 1310250
Ensembl: ENSRNOG00000055790
Position
2:177843647..177962975
AA seq 1881 aa
MIAFGAPRPRGFRLLFSLTPHHFFLFLIGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYIWHSTQHDAVAIQPLYENGTSCSQRAVLVAESTQPIRLSSIILAREVVTDHELRCDVK
VDVIDNIEIVSRTRELYVDDAPLELMVRALDSKGNTFSTLAGMVFEWSIAQDKESSREEL
SSKIRILNYSEAEYSPPDYITEMEKEEKQGDVILVSGMRTGAAVVKVRIHEPFYKKVAAA
LIRLLVLENIFLIPSHDTYLLVGAYMKYRVAKMVQGRMTEGKFPLEHYTLELQDHRLIDV
GLRSGTVALLDEKTAMVTALQLGQTNLVFVHKNVHMRSVSGLPNSTIYVVEPGFLGFTIH
PGGRWSLEVGQVYIITVEVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTLNGSYHMVKA
LKDGAVVINASLTSSLWESNSSQPKTYQINHQQEVKIYFPIQLKPSFLAFPHYPLGISNR
FTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPFRSGNIKVYVM
KLNKMELLPFQADVEIGQIIEVPIAMYHVNTETKEAIAFTDCSHLPLDLNSDKQGVFTLF
KEGIQKPGPMHCSSVHIAATSPGHTLVTISVTGHEEHVWSSATFAAYEPLKALNPVEVAL
VTWHSVKEMVFEGGPHPWILEPSRFFLELSMEKAEAIRITEVRLPAKRKQNQYVYRVLCL
ELGEQVLTLRIGNHPGVLNPSPSVEKVQVRFICAHPASMLVTPMYKVPAGTQPCPLPQYN
KQLIPVSSVRDTVLELAVFDQHGRKFDNFSSLMLEWKSSNETLARFESPKSVEMVARDDG
SGQTRLHGHQILEVHQIKGTVLIGVNFAGYSGKRSPKGISNSPRSAGVELLLVEDVTVQP
ENATIYNHPDVKEVFNLVEGSGYFLVNSSEQDIVTTTYMESEGSVQLVPAHPGFLTLKVY
DLCLAYLGPAMAQVRVSDIQEVELDLIDKVEIGKTVLVVVRVLGSSKHPFRNKYFRNMDV
RLQLASAIVTLRLTEDQDEYSENYMLRAVTVGQTTLVAIATDRMGRKFTSAPRHIEVFPP
FRLVPEKMTLIITNMMQIMSEGGPQPQSTIHFSISNQTVAAVNRRGQVTAKVVGTAVVHG
TIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSTQTPFS
FSNASPMLTFHWSMSKRDVLDLVPRHSEVFLQLPAENNFAMVVHTKAAGRTTIKVTVRSK
NSSFGQFERNVLELSDEIQILVFEKLQLFYADCQREQILMPMNSQLKLHTNREGAASVSS
RVLKCFPNSSVIEEDGEGLLRSGSIAGTAVLEVTSIEPFGVNQTTVTGVQVAPVTYLRLS
SYPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNK
NYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKLISVGDVICFSTQLVSQ
HGEPGVWMISTNNIIQTDTVTGVGVARSPGTATIFHDIPGVVKTFREVVVNASSRLTLSY
DLKTYLTNTPNATVFKLFISTGRSVNLKGSCTPSQALAVEKVLLPETLMLCHVQFSNTLL
DIPASKVFHIYSEFSVEKGVYVCLIKVRQESEELRQVLSVADTSVYGWATLLSERGKNGM
QRILIPFIPGFYMNQSEFVLGHKDTGELRILGVERVLESLEVFHSSPFLTVSGHKHSTLT
TSVTLYLIRIVNFTAFQQMSSPAFINVSCALTNQHEAVVVRAKDVSGADHCEESGVFKNF
VGSYQILLFTLFAVLASTAFIFLAYNAFLNKVQTIPVVYVPTIGPTQPGSYTATCSPPHF
LSSQPPLVQSRLQHWLWSIKH
NT seq 5646 nt   +upstreamnt  +downstreamnt
atgattgcctttggggctcctcgacccagaggcttcagacttcttttctccttgactcca
caccacttcttcctgtttttaattgggaccctggccaacaaacttaatgtacctcaagtg
ttactacccttcagccgggagccaggccgcgtacccttcttgctggaggctcagcggggc
tgctacatctggcattccactcagcatgatgcagttgccatacagcctttatacgaaaat
ggcacctcttgctcccaaagggcagttcttgttgctgaatccacccaaccgatacgactc
agcagtattattctcgctcgagaagtggtgacagaccatgagctacgctgtgatgttaag
gtcgatgtgatagacaacattgagattgtttctcgaacccgggagctgtacgtggacgat
gcaccactggaacttatggtgagggccctggattctaaaggaaacacattcagcactctg
gcgggcatggtgtttgagtggagtattgctcaggacaaggagtcatcaagagaggagctg
tctagcaaaattagaattctgaactactctgaggctgagtattctccccctgactatata
actgagatggaaaaggaagagaaacaaggggacgtgatcttggtgtctgggatgagaact
ggagctgctgttgtaaaagtgcgaattcacgagccgttctacaagaaagtggctgcagcc
ttgatccgcctgcttgttctggagaacatatttcttataccatcccatgatacatatctc
ttagtaggagcctatatgaaatacagagtggcaaaaatggttcagggaagaatgacagag
ggaaaatttcccctggaacattacacgctggagctgcaagaccacagacttatagatgtt
gggcttcgttctggaacagtggctctattggatgagaaaacagccatggtgacagctctc
caactgggccaaactaacctcgtctttgtgcacaaaaatgttcatatgcgctctgtgtct
ggactcccaaactctaccatatatgttgtagagccaggatttttaggtttcacaatccat
cccggaggccggtggagtctagaggtggggcaggtgtacatcatcacagtggaagtgttt
gacaagagcagcacaagggtctacatttctgataatctcaagatcacgttccagttttct
aaggagtactttgaagagcagctgagtactttaaatggatcttaccacatggtaaaggcc
ctgaaagatggagctgtggtgataaatgcaagcctgacctccagcctttgggagagcaac
agttcccagcctaaaacctatcaaatcaatcaccaacaagaagtgaagatttactttccc
attcaacttaaacccagctttctggcatttccccattatcctctgggaatatcgaatcga
ttcacagttcaggtagagggtggtagtggcaacttcacctggagttcttctaacgaaaca
gtggccatggttaccaccaaaggtgtggtaaccgcaggtcaggtgagaggaaacagcacc
attttggcaagagatgtacaaaatccttttcgatctggaaatattaaggtgtatgtcatg
aagctgaacaaaatggaactgttaccatttcaagctgatgtggaaataggccagattatt
gaggtgcccattgcaatgtatcatgtaaatacagagaccaaggaggccatcgcattcaca
gactgctcgcacttacccctcgatctcaactcggacaagcaaggagtcttcactcttttt
aaagaaggtattcaaaagccaggaccgatgcactgttctagtgtccacatagcagccacg
tctccgggccatactctggtgaccatcagtgtgactggacatgaagagcacgtgtggagc
agtgccacatttgctgcttacgagcctctaaaggctctaaaccctgtggaagtggctttg
gtgacatggcactccgtgaaggaaatggtatttgaagggggccctcatccctggatcttg
gagccatcccgattttttttggagctgagcatggagaaggcagaggccattagaataaca
gaagtccggctgccagctaagaggaagcagaaccagtatgtctaccgcgtcctgtgccta
gagttaggggaacaagttctcactttacggattgggaatcacccgggagtcctaaaccct
agtccctctgtggaaaaggtgcaggtgcgcttcatctgtgcccatcctgccagtatgttg
gtgacaccgatgtacaaggtgccagctggcacccagccatgtcctctgccacagtacaac
aagcaactgattcctgtgtccagtgtgagggacacggtcctggaactggcagtatttgat
cagcacgggaggaagtttgataatttcagctcattgatgctagaatggaaatcttccaac
gagacgctagcccgttttgaaagtcctaagtcagtggagatggtagccagagacgatggc
agtgggcagacccggctgcacggccatcagatccttgaggtgcatcagataaaggggact
gtgctcattggagtcaattttgctggttattcagggaagagaagcccaaaagggatttcc
aactcgccaaggtccgcgggggtagaactactcttggtggaagatgtcacagtccagcct
gagaacgccaccatctacaaccatcctgatgtgaaggaagtatttaaccttgtggaagga
tctggctactttctggtcaacagcagtgagcaagacatcgtcaccaccacttacatggaa
tcagaaggctcggtccagttagttccagcacatcctggatttctaaccctgaaagtgtat
gacctgtgcctggcctacttgggtccagcaatggcccaggtcagggtgtcagacatacag
gaggtagagctggatctgatcgataaggtggagatcggtaaaaccgtgttagtggttgtg
agggttcttggctcttctaaacaccctttccggaacaagtacttcagaaacatggatgtc
aggctgcagctggcatctgccattgtcaccctgcgattaacggaagaccaggatgaatac
tctgaaaactacatgctccgtgctgtcactgttggacaaaccacacttgtggccattgcc
acagatagaatggggaggaaattcacatcagcgcctcggcacatcgaggtctttcctcca
tttagactcgttcctgagaaaatgaccctgattatcactaacatgatgcagataatgtct
gaaggtggccctcagccccagtccaccattcacttctctatcagcaatcagactgtagct
gctgttaacaggagagggcaagttacagccaaagtggtgggcacggctgttgtacacggc
accatccagacagtgaatgaagacactggcaaagtcattgtgttttcccaggatgaagtc
caaattgaagttgtccagctccaggctgttaggatccttgcggctgcgacccgactcgtc
acagccacggagatgccagtttacgtcatgggagtgactagtacccagactcctttctcc
ttcagcaatgccagccccatgctcacattccactggtccatgagcaaaagagatgtgctg
gacctggtacccaggcattcagaggtatttctacaacttccggctgagaacaactttgcc
atggttgttcacacaaaagccgctggcaggaccacgatcaaggtcacggtccgcagtaag
aacagctccttcggtcagtttgagaggaatgtgctcgagctgtccgatgagatccagatc
ctggtatttgaaaaactccaacttttctatgcagactgccaacgtgagcagattctgatg
cctatgaattctcagctcaagctacacaccaacagagaaggcgcagcctctgtgagttcc
cgtgttctcaagtgtttccctaactcctccgtcattgaagaagatggtgaaggactcctg
agatctggatccattgcgggtactgcagtattggaagtcacttctatagaaccttttgga
gtcaatcaaacaactgtaactggagtccaggtagcaccagtgacttaccttcggttgagc
agctaccccaagctatacacagcacaaggaaggaccctgtcagcctttcctctgggcatg
tctctcacctttattgttgagttttataataacattggagaaaaattccacacccacaat
actcggctttatatggctctgaacagagacgacttgctgcttattggaccaggaaacaaa
aactatacatatatggcccaggctgtgaataaaggggtgacagttgtgggtctgtgggac
caaagacaccccggcatggcagattacatccctgtggctgtagagcatgccattgagcca
gacaccaagcttatctctgttggcgatgtcatctgcttcagcactcagctcgtcagtcag
cacggtgagcctggggtgtggatgatttccaccaacaacatcatacagacagacactgtc
actggagtaggagtggctcggagcccaggaactgcaacaatttttcatgacatccctgga
gttgtgaaaacgttccgagaggtagtagtcaatgcatcatcaagattgacactcagctat
gacctgaaaacttacctcaccaatacccccaatgcaactgtattcaaactcttcatcagc
acaggcagaagtgtcaacctcaaaggatcctgtaccccaagtcaggctttggctgttgaa
aaagttcttcttcctgagaccctcatgctatgccatgtgcagttcagcaatactttacta
gacattccagcaagtaaagtctttcacatttactcagaattcagcgtggagaaaggggtc
tatgtctgcctaatcaaggttcgacaggagtcagaggagctgcgccaggtcctgagtgtg
gcggacacctcggtctatgggtgggcaactctgctcagtgaacgtggcaagaatggcatg
caaagaatcctcattcctttcatccctggcttttacatgaaccagtccgagtttgttctt
ggccacaaagacaccggggagctaagaatcctgggagtggagagagttcttgagagccta
gaggtcttccacagctccccatttctaacagtctccggccataagcattctaccctcaca
acaagcgtaactctctacctgatacgcatagtcaacttcactgccttccagcagatgtca
tcacctgctttcattaatgtttcctgtgcactgaccaatcaacatgaggctgtggtagtc
agagcaaaagatgtatctggtgcagatcactgtgaagagtcaggtgtcttcaagaatttc
gttggttcttaccagatcctgctgtttacactctttgctgtgttggcatccactgctttc
atcttcctagcatacaatgccttcctgaacaaggtacagactattccagttgtttatgtg
ccaacaataggaccgactcagccaggttcctatacagccacctgttctccccctcacttc
ctgagctcacagccaccactagtgcagagtcggctacaacactggctgtggagtataaaa
cactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (20)   
   RefSeq(pep) (20)   
DNA sequence (25)   
   RefSeq(nuc) (25)   
Protein domain (3)   
   Pfam (3)   
All databases (59)   

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