KEGG   Rattus norvegicus (rat): 365872
Entry
365872            CDS       T01003                                 
Symbol
Aph1a
Name
(RefSeq) gamma-secretase subunit APH-1A
  KO
K06172  gamma-secretase subunit APH-1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04330  Notch signaling pathway
rno05010  Alzheimer disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    365872 (Aph1a)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    365872 (Aph1a)
SSDB
Motif
Pfam: Aph-1 Peptidase_M3_N BRI3BP
Other DBs
NCBI-GeneID: 365872
NCBI-ProteinID: NP_001014277
RGD: 1311546
Ensembl: ENSRNOG00000023816
UniProt: Q5PQQ3
Position
2:186123023..186130886
AA seq 247 aa
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT
DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYV
SGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFD
ACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFVTAGGSLRSIQ
RSLSCKD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgggggctgctgtgtttttcggatgcaccttcgtcgcgttcggcccagccttcgccctt
ttcctgattactgtagccggagaccctcttcgggttatcatcctggtggcgggagccttt
ttctggctggtttccctgctcttggcctctgtggtctggttcatcttggtccatgtgaca
gaccgatcagatgcacggctccagtatggcctcctgatttttggtgctgctgtctctgtc
cttctacaggaagtgttccgttttgcctactacaagctccttaagaaggcagatgagggc
ttagcatcactaagtgaggacggaagatcgcccatctccatccgacagatggcctatgtt
tctggtctgtccttcggtatcatcagtggtgtcttctctgttatcaatattttggctgat
gcacttgggccaggtgtggttgggatccatggagactcaccctattacttcctgacttca
gcttttctgacagcagccattatcctgctccataccttttggggagttgtgttctttgat
gcctgtgagaggagacggtactgggctttgggcctggtagttgggagtcaccttctgact
tcaggactgacattcctgaacccctggtatgaggccagcctgctgcccatctatgcagtc
accgtttccatggggctctgggcattcgtcacagccggaggctccctccggagtatccag
cgcagcctttcgtgtaaggactga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system