KEGG   Rattus norvegicus (rat): 366163
Entry
366163            CDS       T01003                                 
Symbol
Aqr
Name
(RefSeq) RNA helicase aquarius
  KO
K12874  intron-binding protein aquarius
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    366163 (Aqr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    366163 (Aqr)
Spliceosome [BR:rno03041]
 Complex B
  Other components
   Prp19-related factors
    366163 (Aqr)
 Complex C
    366163 (Aqr)
SSDB
Motif
Pfam: Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 ResIII AAA_30 UvrD-helicase SLFN-g3_helicase DEAD Parvo_NS1 AAA_16 UvrD_C_2 AAA DnaB_C PhoH AAA_22 ATPase RecA
Other DBs
NCBI-GeneID: 366163
NCBI-ProteinID: NP_001094457
RGD: 1306223
Ensembl: ENSRNOG00000008912
UniProt: A6HP79 F7FAP1
Position
3:complement(121329287..121399375)
AA seq 1484 aa
MAAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEEIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFP
FFFKRILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSIPLSE
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSSLVHREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
ARDSLVKFFGPLSSNTLHQVASYLCLLPTLPKNEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYDTFNVIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
IEHLKASFPGHNVKVTVNDPALQIPPFRITFPVRSGKGKKRKDADGEEDDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYMSRVKNTGSASPD
AAEVATFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPPHEVQVIKNMPQMANFVYNMYMHLIQTTHHYH
QTFLQLPPAMVEEGEEVQSQETEMEAEEETGSVQANLTPSPTDASLSQETPTSQPDCSNQ
TEAASSHTEDTSALCDITTAAEPVSAAAEAATPQDGPSVPAETK
NT seq 4455 nt   +upstreamnt  +downstreamnt
atggcggctcctgcgcagcccaagaaaatcgtggcccccaccgtgtcccagatcaacgca
gagttcgtcacccagctggcatgtaaatactgggctcctcatatcaagaagaaatcacct
tttgatataaaagtgatagaagaaatatatgaaaaagagatcgtcaaatcacggtttgcc
atcagaaaaataatgctgctggaatttagccaatatcttgaaaattatctttggatgaat
tattcgccagaagtttccagcaaagcctatttaatgtccatctgctgtatggtgaatgag
aagttcagagaaaatgtcccagcctgggagacctttaagaagaagccagaccacttcccc
ttcttctttaaacgcatcttgaaagcagcactagctgagactgatggcgagttctccctc
cacgagcagaccgtgctcctgcttttcctggatcattgcttcaatagcttggaagtagac
ttgataaggagtcaagtacagcagcttatctcccttcctatgtggatgggcttgcagccg
gcacgattggaattagaattaaaaaagacaccaaagctaaggaaattctggaacttgatt
aaaaagaatgatgaaaagatggacccagaagcaagagagcaggcctaccaagaaaggagg
tttctttcccagctcatccagaagttcatctccgtgttgaagtccatcccactttctgag
cctgtcactatggacaaagttcattactgtgaaagattcatcgaacttatgattgatcta
gaggctctgctccccacaaggcgctggttcaacaccatcctggatgactcccacctcttg
gtgcactgttacctttccagtcttgtccacagggaagaggatggccatctgttttcccag
ctattagacatgctgaagttctatacgggctttgaaattaacgaccagactggaaatgcc
ctgacagagaacgagatgaccacgattcactatgacagaatcacatctctgcagagagct
gcgttcgcgcatttccctgagctctatgactttgccctctccaatgtggcagaagtagat
gcccgggattccttggtcaagttttttgggcctctcagttcaaacacactccaccaggtg
gcatcatacctctgcctcttgccaacgctccctaaaaatgaagatacaacttttgataaa
gagtttcttctagaattgctggtgtctcgccatgaacgccgcatctctcagattcagcag
ttgaatcagatgcctttgtatcctactgagaaaattatctgggatgaaaacatcgtccct
accgagtactattctggggaaggctgtcttgctctccccaagttgaatttgcagttttta
actctacatgactatctcctgaggaactttaatctcttccgcttagaatcaacttatgaa
attagacaagacattgaggacagcgtcagcagaatgaagccatggcaatctgagtatggc
ggtgtcgtgtttggtggttgggcacgaatggctcagcccattgtggctttcactgtagtc
gaggttgccaaacccaacattggtgaaaactggccaacccgagttcgtgcagatgtcacc
atcaatctgaatgtcagagaccacatcaaggatgagtgggaaggtcttcgcaaacacgat
gtatgctttttaattactgtgcgtcccacaaaaccttacggcactaagtttgacaggagg
aggccttttattgagcaagttggtctggtgtacgtcagaggctgtgagatccagggcatg
ctggacgacaaagggcgagtcatcgaagacggacctgaacccagacccaatcttagagga
gagtcaaggacatttcgagtatttttggatccaaaccagtatcaacaggatatgaccaat
actatacaaaatggagccgaagatgtgtacgacactttcaatgtcataatgaggaggaaa
ccaaaggagaataacttcaaggccgtgttggagactattcgaaatctgatgaataccgac
tgcgtggtcccagactggctgcatgacatcattttaggttatggggacccaagtagtgcc
cattattccaaaatgcccaatcagattgctacgttggatttcaatgacacttttctctcc
attgaacatttgaaagccagttttcctggtcataatgtcaaagtgaccgtgaatgaccca
gctctacaaataccccctttcagaataactttcccagtaagaagtggaaaggggaagaaa
agaaaagatgcagatggggaagaagacgacacggaagaagcaaagaccttaattgtggaa
cctcacgttattcctaatagaggtccttatccttacaaccagcccaaacgtaatacaatc
cagttcactcatacacagatagaggccatccgggccggaatgcagcctggactgactatg
gttgtgggaccacctggtacaggaaaaacagatgttgcagtccagatcatttccaacatc
taccacaattttccagaacagaggactttaattgttactcattccaatcaggctctgaac
cagttgtttgagaaaatcatggctttagacattgatgagcgccatctcctgcgtctgggt
catggagaggaagagctagagacggagaaagactttagcaggtatggaagagttaattat
gtcctggctcgaagaatagaacttttagaagaagtcaaacgattacaaaagagtctgggg
gttccgggagatgcttcgtatacctgtgaaactgcaggctatttcttcttatatcaggta
atgtcgcgttgggaagaatacatgagcagagtgaagaacacagggagcgccagcccagat
gctgcggaggtcgccacgttcttccccttccatgagtattttgccaatgctcctcagccc
atctttaaaggcagatcttatgaagaagacatggaaatcgcagaagggtgcttcaggcat
attaagaaaatcttcactcagcttgaggaattcagagcttcagaactgcttcgcagtgga
ctggacaggtctaaatacctcttggtgaaagaagccaaaatcattgctatgacgtgtact
catgctgccttgaaacgacatgacttggtcaagttgggtttcaagtatgacaacatttta
atggaagaggctgctcagattctggagatagaaacctttatcccactacttctgcagaat
cctcaagacggattcagccgattgaaacgatggattatgattggtgatcaccaccaattg
cctccagtcattaagaacatggcctttcagaagtattccaatatggagcagtctcttttt
actcgctttgtccgggttggagttcctactgtggaccttgatgctcaagggagagcccgg
gccagcttgtgtaacctctacaactggcgttacaaaaacctagggaacttgccacacgtg
cagctcctgccagagttcagcacagccaacgcaggcctgctgtacgacttccagctcatc
aatgtggaagacttccagggagtgggagagtcggagcctaacccttacttctaccagaac
ctcggagaggcagagtacgtagtagcgctcttcatgtacatgtgcttgcttggctaccct
gcggacaagatcagcattctgacgacctacaatggacagaagcacctgatccgggacatc
atcaataggcgctgtgggaataatccactcattgggaggccgaacaaggtgacaactgtt
gataggttccaaggtcaacagaatgactacatcctcctttctctagtgcggaccagggcc
gtgggccatttgagggatgtgcgccgcttggtggtagccatgtcgagagccaggcttggc
ctgtatatcttcgctagagtatccctcttccaaaattgctttgaactgactcctgctttc
agccagctcactgcccgcccactgcatttgcatattattccaacagaacctttcccaacc
tccagaaagaatggagagagacctcctcatgaagtacaggtaataaagaacatgccccag
atggcgaattttgtgtacaatatgtacatgcatttgatacagacgacccaccattatcat
cagactttcttacaactaccgcctgccatggtggaagaaggtgaggaggttcagagccaa
gaaacagaaatggaagcagaagaggaaactgggtctgttcaagctaacctcacacccagt
ccaacggatgccagcctgagtcaagagaccccaacttctcagcctgactgctccaatcag
acggaggctgcctccagtcacacagaagatacctctgctctgtgtgacattactactgca
gccgagcctgtctctgcagcggcagaagctgccaccccacaagatgggccttctgttccc
gcagagaccaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (38)   

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