KEGG   Rattus norvegicus (rat): 366980
Entry
366980            CDS       T01003                                 
Symbol
Arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
  KO
K11765  AT-rich interactive domain-containing protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    366980 (Arid2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    366980 (Arid2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    366980 (Arid2)
   03021 Transcription machinery [BR:rno03021]
    366980 (Arid2)
   03036 Chromosome and associated proteins [BR:rno03036]
    366980 (Arid2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    366980 (Arid2)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     366980 (Arid2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    366980 (Arid2)
SSDB
Motif
Pfam: ARID RFX_DNA_binding FOXP-CC EAD2
Other DBs
NCBI-GeneID: 366980
NCBI-ProteinID: XP_345868
RGD: 1311105
Ensembl: ENSRNOG00000004831
UniProt: D3ZJU0
Position
7:129326371..129443813
AA seq 1826 aa
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWREKTDRDFVKFWKDI
VDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
SNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLE
VLYMLTEMGDIACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
MRPQAIEQVQTQSHGAPGPACRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSSGQAHIHVIGVR
RRALPLPIQMYYQQQPVSTPVVRVDAVADVSPTPSPAGIPHGSQAVGNHFQRTPVTNQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQ
NSVPQTAVPVSIAVGGPAQSSLAQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVPG
QIPSGTPVTVIQQTVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGSQ
PQDTVIIAPPQYVTTSASSIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKPL
PSQHVSSTVVQQPVQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPTGQTVQ
LTGQPNITPSSSPSPVPATSNQVPAAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPAA
PAQQVQVQVQPPQVQVQVQPQQAGAGVGQPASSESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQVANSQAAGFGAQGQTPAQQLLVGQPNVQLVQSAMPPTGGVQT
VPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGIS
MSGAQAGAGLQVQTLPAGQSACTSAAPPFKGDKIICQKEEEAKEATGLHVHERKIEVMEN
PSCRRGTTNTSNGDTSESETQVGSLLNGRKYSDSSLPPSHSGKLQSEPNPCSPLSNGPSL
ELGENGASGKQNSEPVDMQDVKSDLKKTLVNGICDFDKGDGSHLSKNIPNHKTCNHVGNG
EVSPVEPQGTLGATQQETAKGDQLERVPNGPALTLGGSPATSSVQEASSVATQPFSGTDL
PNGPLASGLTSDVPHQRPSVVVSPRPTAPVIQGHPVIAAPHSGSRGPASALSSDARSTNG
TAECKTVKRPAEDGDREAAPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKV
AIGSAAQQKPPPPPAYAQSALPQNTPMPPSPAVQVQGQPSSSQPSPVSASSQHADPVRKP
GQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQD
KHCSKDALLAGLKQDEPGQAANQKSSTKQPTVGSTGSAPRAQKAIASHPSAALMALRRGS
RNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLAISNMEAS
STLAKCLYELNFTVQSKEQEQDSEML
NT seq 5481 nt   +upstreamnt  +downstreamnt
atggcaaactcgacggggaaggcgcctccggacgagcggaggaagggactggctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccgtttaagaagatccctgcggtg
ggtgggaaggagctggatcttcacgggctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttatctagaaaagtac
gagaaagttcaccatttcggggaagatgatgatgaggtaccaccgggcaatccaaagcca
cagctccctattggtgcgattccgtcttcctacaactaccagcagcacagcgtgtcagat
tatctacgtcaaagttatgggttatctatggattttaattcgccaaatgattataataaa
ctggtgctttcactgttatctggactcccaaacgaagtggacttcgccattaatgtgtgc
actctcctctcaaacgaaagcaagcacgtcatgcagcttgaaaaagatcccaaaatcatc
actttattacttgctaatgctggggtgtttgatgacactttaggctcgttctctactgtc
tttggagaagaatggcgagagaagactgacagagactttgttaagttttggaaagacatt
gtggatgacaatgaagtgcgagatctcatttctgacagaaacaaggctcatgaagataca
ccaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaacgac
atcgaaggacagcgggttcttcagattgcagtgattttgcgaaacctttcctttgaggag
agcaatgttaagctcttggcagctaatcgcacctgtcttcgtttcctattactctctgca
catagtcattttatttcattaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttttactggaccctgttgatttcaaaaccactcatctgatgtttcatactgttacg
aaatgcctgatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaggataatggtgttttgatttgtgaatatgtggatcaagattcatat
agagagataatttgtcacctcactttgcccgatgtgctgcttgtaacctcaactctagag
gtgctctacatgctcaccgaaatgggggacattgcctgcacaaagatcgcaaaagtagaa
aagagcatagacatgctcgtgtgtctggtttccatggacattcagatgtttggccctgat
gcactagctgcagtgaagcttgttgaacatccaagctccagtcaccaagttttatctgaa
atgaggccacaggctatagagcaggtccaaacccagagccacggggcacctggcccagct
tgcagagcagttgtagcacagcacgccgctccccctccaggcatcgtggaaatagacagt
gagaagttcgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttcagtc
tctcgggcagaaatgtattccgagtatctctcaacttgtagtaaattagctcgtggtggc
atcctcacatcgactgggttttacaagtgtcttagaacagtttttccaaatcacacagtg
aagagagtggaagactccagtagcagcgggcaggcacatatccacgtcataggtgtgaga
cggagggctctgccgctgcccattcagatgtactatcagcagcagccggtttcaactccc
gttgttcgagtcgatgctgttgctgacgtgtctccaactccttcacctgcaggaatccct
cacggatcacaagctgtgggaaatcattttcagaggactcctgtcaccaatcaatcttca
aatttgactgcaacacaaatgtcttttccagtacaaggcgttcatactgtggcacagact
gtttctagaattccaccgaatccttcagttcatacccaccagcaacaaaattctccagtg
actgtcattcagaataaagctccaattccctgtgaagtcgttaaggcaacagtaatccag
aactctgtcccccagacagcagttcctgtgagtatcgctgttggaggacctgcacagagc
tctttagctcagaatcatagtgcagggccacagcctgttacagttgtaaattctcagaca
ttgcttcaccatccctctgtgatgccacagccatctccactacacacagtggtgccagga
cagatcccgtcaggaactcctgtcacagtaatccagcaaactgtaccacagagtcatata
tttggacgagtacagaacataccagcatgtacgtccacagtttcacagggtcagcagtta
atcaccacgtcaccacagcctatgcacacgtcatctcaacagacagcagctggtagccag
ccacaggacactgtcatcatagcacctccacagtacgtaacaacttctgcatccagtatc
gtctcagcaacttcagtacagaatttccaggtagctacgggacaggtagttaccatagct
ggtgttccaagtccacaaccctccagggtgggattccagaacattgcacccaagccgctt
ccttctcagcacgtttcatcgacagtggtacagcagcctgttcaacaaccacagcagcca
gcccagcaaagcgtagtgatcgtaagccagccagctcagcaaggccagacttacgcacca
gccattcaccaaattgttcttgctaacccggcagctctcccaactggtcagacagttcag
ctgactggacaaccaaacataactccatcttcttcaccatcacctgtcccagctactagt
aaccaagtccctgcggccatgtcatcttcttccacccttcagtcacagggaccccctcct
actgtcagtcagatgctgtctgtgaagaggcagcagcagcagcagcattcaccagcggcg
ccagcacagcaggtccaggtccaggtgcagccgccgcaagtccaggtgcaagtgcagccc
cagcaggcgggtgcaggagttggtcagcccgcttccagcgagtctagtctgataaaacag
ctgctgctcccaaagcggggcccttccaccccagggggtaagcttatcctcccagcccca
cagattcctccccctaacaatgccagagcccccagcccccaggtggtctatcaggtggcc
aatagccaagcagctggctttggcgcgcaggggcagacccctgctcagcagctgctggtt
ggacagccaaatgttcagttggtccaaagtgcaatgccacccacggggggagtgcaaact
gtgcccatttccaacttacaaatactgccgggtccactgatctcaaacagcccagcaacc
attttccaagggacttccggcaaccaggtaactataacagttgtgccaaataccagtttt
gcaactgcgactgtgagtcagggaaacgcagctcagctcatcgctccagccggtattagc
atgagtggggcgcaggccggagctggacttcaggtgcagacgcttccagccggacagtca
gcgtgtaccagcgctgcccccccattcaaaggcgataagatcatttgccaaaaggaggag
gaggcaaaggaagcaacaggtctacatgttcatgagcggaaaatcgaggtcatggagaat
ccttcctgccgacgaggaaccacgaacaccagcaatggggacacgagtgagagtgagacc
caggtggggagcctgttaaacgggagaaagtacagtgactcaagtctacctccttcacac
tcagggaaacttcagagtgagcccaacccgtgctcaccactcagcaatgggccatcgttg
gaattaggtgagaatggagcatctggaaaacagaactcagaaccagtggacatgcaggat
gtcaaaagtgatctgaaaaaaacccttgttaatggaatctgtgattttgataaaggagat
ggttctcatttaagcaaaaacattccaaatcacaaaacttgtaatcatgtaggaaacggt
gaggtatctccagtggagccacaggggactttgggtgccacccagcaagagactgccaaa
ggcgaccagctagaaagagttcccaatggacccgcgttaactctgggtgggtcaccggcc
accagcagtgtgcaagaagcttcgagtgtggcgacacagccattcagtggtactgacttg
cctaacggacctctagcttcaggtttgacttcagatgtgcctcatcagcgcccaagtgtg
gttgtctcaccgcgtcctacagcccctgtcatacaggggcacccggtcatagcagctccc
cactcaggatctagagggcccgcctccgctctgtcatctgacgctcggtctacaaacggc
acagccgagtgcaaaactgtgaagaggccagcagaggatggcgatagggaagcagccccg
ggaattccaaataaagtaggggtcagaattgtcacaatcagcgaccccaacaatgctggc
tgcagtgccaccatggtggctgtcccagcaggcgccgacccgagcactgtagctaaagta
gcaataggaagcgcagctcagcagaagccgccgccgccgccagcctacgcgcagagcgcg
ctcccacagaacactcctatgccaccttcaccagctgttcaggtgcagggccagcctagc
agttctcagccttctccagtcagtgcgtccagtcagcatgcagatccagtgagaaaacct
gggcagaacttcatgtgtctgtggcagtcttgtaaaaagtggtttcagacgccgtcacaa
gtgttctaccacgcggccactgaacatggagggaaggatgtgtacccggggcagtgcctc
tgggaaggctgcgagcccttccagcggcaaaggttctcgttcatcacccacttacaggac
aagcactgttcaaaggacgctctgcttgcagggttaaaacaagatgaaccaggacaagcg
gcaaatcaaaaatcttctaccaagcagcccactgtggggagcacaggctctgctcccaga
gcccagaaggccattgcaagccaccccagtgctgcactcatggctctgcggagaggctcg
aggaaccttgtcttccgggactttacagatgaaaaagagggaccaataactaaacacatc
cgactaacagctgccttaatattaaaaaatattggtaaatactcagagtgtgggcgcaga
ttgttaaaaagacatgaaaacaacttatcagtgctagccattagtaacatggaggcttcc
tctacccttgccaaatgcctttatgaacttaattttacagttcagagtaaagaacaagaa
caagactcagaaatgctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system