KEGG   Rattus norvegicus (rat): 367167
Entry
367167            CDS       T01003                                 
Symbol
Traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    367167 (Traip)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     367167 (Traip)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    367167 (Traip)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-ANAPC11 zf-RING_11 zf-C3HC4_3 HIP1_clath_bdg BRE1 DUF3450 zf-RING-like Fez1 GAS zf-RING_16 WEMBL His_kinase APG6_N Zn-ribbon_8 RINGv FANCL_C DUF745 IMS_C Seryl_tRNA_N
Other DBs
NCBI-GeneID: 367167
NCBI-ProteinID: NP_001102474
RGD: 1309761
Ensembl: ENSRNOG00000030101
UniProt: F7ETT8 B1WC52
Position
8:117520476..117540253
AA seq 469 aa
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKTIIN
KLFFDLAQEEESVLDAEFLKNELDSIKAQLSQKDREKRDSQAIIDTLRDTLEERNATVES
LQNALNKAEMLCSTLKKQMKFLEQQRDETKHAQEEARQLKSKMKTMEQIELLLQSQRSEV
EEMIRDMGVGQSAVEQLAVYCISLKKEYENLKEARKASGELADRLRKDLASSRSKLKTVN
TELDQAKLELRSAQKDLQSADKEITSLRKKLTILQGTLSLPPVTSETVSRLVFESPAPVE
MLKPRLHRPPFSDEIDLNATFDVNTPPAQTSSSQHCHPKKLCLERARSPMQDILKIPKVS
KSESQLSLGGQRCVGEPDEELAGAFPLFIRNAVRGQKQPNRTTAESRYSTDVVRIGFDGL
GGRTKFIQPTDPTIIRPMPVKPKAKSKQKVRIKTVNSASQPKLDTFLCQ
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgcctatccgcgcgctgtgcactatctgctccgatttcttcgatcactcccgtgacgtg
gctgccatccactgtggccacacttttcatctgcaatgcctaatccagtggtttgagaca
gcaccaagtcggacctgcccccagtgtagaatccaggttggcaaaaagactatcatcaac
aagctcttttttgaccttgcccaggaagaggagagtgtcttggatgcagaattcttaaag
aatgaactggacagtatcaaggcccagctctcccaaaaagacagggagaaacgggacagc
caggccattatcgacactctacgggacacattggaggaacgcaatgccactgtggagtcc
ctgcagaacgccttaaacaaggcagagatgctgtgttccaccctgaaaaaacagatgaaa
ttcctggagcagcagcgggatgagaccaaacacgctcaggaggaggcccgccaactcaag
agcaagatgaaaaccatggagcaaattgagctcctactccagagccagcggtctgaggta
gaggagatgatccgagacatgggtgtgggacagtcagcggtggagcagctagctgtgtac
tgcatatccctcaagaaagagtatgagaatctgaaagaagctcggaaggcctcaggggag
ctggctgacaggctgaggaaagacttggcgtcttctaggagcaagctgaagactgtcaac
actgagctggatcaggccaagttagaactgaggtcagcccagaaggacttacagagcgct
gacaaggagatcacgagcctaagaaagaagctaacgatcctgcaggggaccttgagcctg
cctccagtgaccagtgagactgtcagccgcctggtttttgagagcccagcccccgtggaa
atgctgaagccaaggcttcaccgaccacccttcagtgatgagattgatctcaacgctacc
tttgatgtaaatacccctcctgcccagacctccagctcccagcattgccaccccaagaag
ctctgcctggagagggcacgctctcccatgcaggacatcctcaagatacccaaagtctcc
aagtcggagtcccagctctcactgggtggccagcgatgtgtaggagagccagatgaggag
ctggctggtgccttccctctcttcatccggaatgctgtccggggtcagaaacagcccaac
aggaccacagcagaatcccgttacagcacagatgtggtaagaataggcttcgatgggctt
ggaggacgaacaaaattcatccaacctacagacccaaccattatccgaccaatgcctgtt
aaacccaaggccaagagtaaacagaaagtgagaataaagactgtgaattctgcctcccag
cccaagctggataccttcttatgtcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (26)   
   Pfam (26)   
All databases (45)   

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