KEGG   Rattus norvegicus (rat): 367172
Entry
367172            CDS       T01003                                 
Symbol
Dhx30
Name
(RefSeq) ATP-dependent RNA helicase DHX30
  KO
K13185  ATP-dependent RNA helicase DHX30 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    367172 (Dhx30)
   03029 Mitochondrial biogenesis [BR:rno03029]
    367172 (Dhx30)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     367172 (Dhx30)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    367172 (Dhx30)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    367172 (Dhx30)
SSDB
Motif
Pfam: Helicase_C DEAD HA2_C OB_NTP_bind dsrm Dicer_dimer nSTAND3 AAA_22 AAA_19 HA2_N AAA_16
Other DBs
NCBI-GeneID: 367172
NCBI-ProteinID: NP_001013267
RGD: 1308888
Ensembl: ENSRNOG00000029194
UniProt: Q5BJS0
Position
8:complement(118943186..118975319)
AA seq 1194 aa
MFTLDSFRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTISRASRDLLKEFPQPKNLLNSV
IGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQL
FKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPENIRPAGTGG
LSRSLGREEEEDEEEELEEGTIDVTEFLSMTQQDSHNPLRDSRGGSFEMTDDDSAIRALT
QFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLATLTLLWPCPMTFVAKGRRKAEA
ENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIEA
FLSHYPVDSSWISPELRLQSDDILPLGKDSGPLSDPITGKPYMPLSEAEEVRLSQSLLEL
WRRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR
GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL
LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS
RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVL
HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP
PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR
GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAV
DSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLL
VVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRTSREN
YLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVLM
AGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAV
KSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRE
LRRALGRMVERSLRSELAALPLSVQQEHGQLLALLAELLRGPCGSFDVRKTADD
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgttcaccctggactcattcagaaaagatcggacccagcacaggcagcgtcaatgcaag
cttcccccaccccgccttccacccatgtgtgtcaaccctgcccctggagggaccatctct
cgagcttctagggacctattaaaagagtttccacagcctaaaaaccttctcaacagcgtg
attggaagagctcttggcatctcacatgcaaaagacaagctagtctatgtgcacacgaat
ggaccgaagaaaaagaaagtcacactgcacataaagtggcccaagagcgtggaggtggaa
ggctatggcagcaagaagatcgatgccgagcggcaggcggcggcggcagcctgccaactc
ttcaagggctggggtctcctgggtccacggaatgagctgtttgatgcagccaaatatcga
gtgctagctgatcgttttggatctccagctgacagctggtggcgcccagaacccaccatg
cctccaacttcctggcggcagctgaatcctgagaacatacggccagcgggtactggagga
ctgtcccgatccttaggccgagaggaagaggaggatgaggaggaagagctagaagagggg
accattgatgtgacggagtttttgtccatgacccagcaagactcccacaacccactcagg
gactcaagggggggctcctttgaaatgacagatgatgacagtgctattagagctctgacc
cagtttccacttcccaagaaccttctggccaaagtgattcagattgcaacatcttcctcc
acagctaagaacctcatgcagttccatactgtgggtaccaagaccaagctggctacactc
actctgctctggccctgtcccatgacctttgtcgccaaagggcgccgcaaagctgaggct
gagaataaggcagcagccttggcttgcaagaaactgaagagcctgggccttgtggacaga
aacaatgagccacttacccatgccatgtacaacctggcttccctgcgtgagttgggtgag
acccagcgccggccatgtaccatccaggtgcctgagcccatccttcgcaagatagaggcc
ttcctgagtcattacccggtggacagttcatggatttccccagaactccggctgcagagt
gatgacatcttgcccttaggcaaggactcagggcccttgagtgaccctatcacaggcaag
ccatacatgcccctgtcagaagcagaggaggtgcgcctgagccagagcctgctagagctg
tggcggaggagagggccaatctggcaggaggccccccagctacctgtggaccctcatcgg
gacactatcctcagtgccattgaacaacacccagtggtagtcatctctggggacacaggc
tgtgggaagaccacgcgtatccctcagctgctattggagcgctatgtgactgagggtcga
ggtgcccgctgcaatgtgatcatcacacaacctcgccgaatctcagctgtgtctgtggcc
cagcgggtcagccatgaactgggaccctccttgcgccggaatgtgggcttccaggtacgc
ttggaaagcaagcctccagcccgaggtggggcgctgctcttctgcactgtgggtatcctg
cttcgaaagctgcagagcaaccccagcctggagggtgtgagccacgtcattgtggatgag
gtccatgagcgggatgtgaacacagacttcctgctgattctgctcaagggcctgcagcgg
ctcaacccagcccttcggctggtgctcatgagtgctacaggagataatgagcgcttttcc
cggtactttgggggctgccctgtcatcaaggtacctggcttcatgtatcctgtcaaggaa
cactacctagaggacatcttggccaagctgggtaaacaccagtacccacaccggcaccgg
caccatgagtctgaagatgagtgtgcacttgatttggaccttgtgactgatctggttctg
cacatcgatgcccgtggggaaccaggtgggatcctgtgctttctgcctggttggcaagaa
atcaaaggagtgcaacagcggctgcaggaagccctgggcatgcatgagagcaagtacctt
atcctaccagtgcactccaatatccccatgatggaccagaaggccatattccaacagcct
ccacttggggtgcgcaagattgtattggccaccaacattgctgaaacctccatcacagtt
aacgacatcgtgcatgtcgtggacagcggtctgcacaaagaagaacgctatgacctgaag
accaaggtgtcctgcctggagaccgtgtgggtgtcgagagcaaatgtgattcagcgccgg
ggcagggcaggccgctgccagtcaggttttgcctaccacttgttcccgaggagccggctg
gagaaaatggttcctttccaagtgccagagatcctgcgcacacctcttgagaacctggtg
ctgcaagccaaaatccacatgcctgagaagacggcagtggagttcctctctaaggctgtg
gacagtccaaatatcaaggcagtggatgaggccgtgatactgctccaggagattggggtg
ctggaccagcgggagtacctgactaccttggggcagcgcctggcccacatctctactgat
ccccgactggccaaggccatagtgttggctgccatcttccgttgcctgcacccactgctg
gtggttgtttcctgccttacccgggaccccttcagcagcagtttgcagaaccgggcagag
gtagacaaggtgaaggcattgctgagccatgacagtggcagtgaccatttggccttcgtg
cgggctgtggctggctgggaggaggtactgcgctggcaggaccgtacctccagggaaaac
tacctggaagaaaaccttctgtatgcccccagcttgcgcttcatccacgggctcatcaag
cagttctcagagaatatttacgaggccttcctagtgggaaagccctctgactgcacactg
ccctctgctcagtgcaatgagtacagcgaggaagaggagctggtgaagggtgtgctgatg
gctggcctctaccccaacctcatccaggtgaggcaaggtaaggttactcggcaaggcaag
ttcaaacccaacagtgtcacttacaggaccaaatctggcaacatcttgctgcacaagtca
accattaacagggaggccacccggttacggagccgatggctgacatatttcatggccgtc
aagtccaatggtagcgtctttgttcgagattcttcccaggtgcacccactagctgtgttg
ctcctaacagatggggacgtgcacattcgagatgacggacgtcgggccaccatttcactg
agtgacagtgacctgctgcggctggaaggtgattcacgaactgtgcggttgctaagggag
cttcggcgggccctaggaaggatggtggagcggagcctccgcagcgagctggctgcactt
cctcttagtgtgcagcaagaacacgggcagctgcttgcactgctggcagagctactgcgg
ggaccttgtggcagctttgacgtgcgcaagacagctgatgactga

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