KEGG   Rattus norvegicus (rat): 367645
Entry
367645            CDS       T01003                                 
Symbol
Pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
  KO
K15255  ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    367645 (Pif1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    367645 (Pif1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     367645 (Pif1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    367645 (Pif1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA maintenance factors
    367645 (Pif1)
SSDB
Motif
Pfam: PIF1 Pif1_2B_dom AAA_30 AAA_19 Herpes_Helicase UvrD_C_2 AAA_22 AAA_16 ABC_tran RsgA_GTPase AAA_24 PhoH AAA_7 Parvo_NS1 T2SSE
Other DBs
NCBI-GeneID: 367645
NCBI-ProteinID: NP_001037718
RGD: 1586053
Ensembl: ENSRNOG00000015878
UniProt: Q1HG60
Position
8:75005820..75015331
AA seq 637 aa
MPSSTEVATDECDDTELRCRVAVEELSPGGQPRKRQALRAAELSLGRNERRELMLRLQAP
GPEGRPRCFPLRAVRLFTRFAAVGRSTLRLPADGVPRAGSVQLLLSDCPPERLRRFLRTL
RLKLAVAPGPGPASARAQLLGPRPRDFVTISPVQPEELRRAAATKAPDSALEKRPMESQP
SMEAPRWPLPVKKLRMPSSKPKLSEEQAAVLRMVLKGQSIFFTGSAGTGKSYLLKHILGS
LPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAHRPGVRQGWLNCQRLV
IDEISMVEADFFDKLEAVARAVRQQKKPFGGIQLIICGDFLQLPPVTKGSQHPRFCFQAK
SWRKCVPVTLELTEVWRQADQTFISLLKAVRLGRCSDEVTRQLRATAAHKVGRDGIIATR
LCTHQDDVALTNEKRLKELPGDVHSFEAIDSDPELSRTLDAQCPVGRVLQLKLGAQVMLV
KNLAVSRGLVNGARGVVVGFESEGRGLPRVRFLCGITEVIRTDRWTVQVTGGQYLSRQQL
PLQLAWAMSIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLRVLDFDPTVVRCD
SRVLQFYATLRQGRGLSLESQDDEEASSDLENMDPNL
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgccttctagcactgaggtggcgaccgatgaatgtgatgacaccgagctgcggtgccgg
gtagccgtagaggagctgagtcctggagggcaacctcgcaagcgccaggctctgcgcgcc
gcagagctgagcctaggtcggaatgaacgccgcgagttgatgctgcgactgcaggcaccc
ggacccgaagggcggccacgctgtttcccactgcgcgccgtgcgcctcttcacccgcttc
gccgcagttgggcgcagcactttgcgactcccggccgatggcgtgccccgggctggctca
gtgcaactgctgctctctgactgtcccccggagcgcttgcgccgcttcctgcgcaccctg
cgcctgaagctggcggtcgcccctgggccgggacccgcctctgcccgtgcgcaattgctc
ggtccgcggccccgagactttgtcacgatcagtccagtgcagccggaggaactgcgccgt
gctgcggccaccaaggctccagactcagcgctggaaaagcggccaatggaatcccagcct
agtatggaagctccaaggtggcccctgcctgtgaagaagctacgcatgccctccagcaaa
ccgaagctttccgaagagcaggccgctgtgctgcggatggttctgaaaggccagagcata
ttctttaccgggagtgcagggacagggaagtcctacctgctgaaacatatcctgggttcc
ctgcctcctactggcactgtggccactgccagcactggggtggcagcctgccacattggg
ggcaccacccttcatgcctttgcaggcatcggttcaggccaggctcccctggcccagtgt
gtggctctggcccatcggcctggtgtgcggcagggctggctgaactgccagcgtttggtc
attgatgagatctccatggtagaggcagacttctttgacaagttggaagctgtggccaga
gctgtccggcaacagaagaaaccatttggagggatccagcttattatctgtggggacttc
ctacagttgccgccagtgaccaaaggttcccagcatcctcgattctgctttcaggccaag
agctggaggaagtgtgtaccagtgactctggagctgactgaggtgtggaggcaagcagac
cagaccttcatctctctcctgaaggctgtgagattaggcagatgttcagatgaagtgacc
cgccagctcagggccacagctgcccataaggtgggacgagatggaattatagccacgaga
ctgtgcacccatcaggatgatgtggcccttaccaatgagaagcggctgaaggaactacca
ggtgatgtacacagctttgaggctatagacagtgaccctgagctaagccggaccctggat
gctcagtgccctgtaggccgtgtccttcagttaaagctgggggctcaagtcatgctggtg
aagaacttagcagtgtctcggggcctggtgaatggtgcccgaggggtggtagtcgggttt
gagtcagaaggaagagggcttccccgggtacggttcctgtgtggcatcactgaggtcatc
cgcaccgaccgctggacagtacaggtcactgggggccagtacctcagccggcagcagctt
cccctacagctagcctgggcaatgtccatccacaaaagccagggcatgtctctggactgt
gtagagatctctctgggccgtgtgttcgccagtggtcaagcctatgtggccctctcccgg
gcccgtagcctccagggtctacgtgtgctagacttcgaccccactgtggttcgatgcgac
tcccgagtgctgcaattctatgccaccctgcggcagggcaggggcctcagtctggagtcg
caagacgatgaggaggcaagctcagatctggagaacatggacccaaacctctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (46)   

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