KEGG   Rattus norvegicus (rat): 369017
Entry
369017            CDS       T01003                                 
Symbol
Krt5
Name
(RefSeq) keratin, type II cytoskeletal 5
  KO
K07605  type II keratin, basic
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    369017 (Krt5)
   04147 Exosome [BR:rno04147]
    369017 (Krt5)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     369017 (Krt5)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   369017 (Krt5)
  Exosomal proteins of other body fluids (saliva and urine)
   369017 (Krt5)
  Exosomal proteins of colorectal cancer cells
   369017 (Krt5)
  Exosomal proteins of bladder cancer cells
   369017 (Krt5)
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 ATG16 CENP-F_leu_zip Alanine_zipper Baculo_PEP_C DUF745 COG6_N APG6_N SlyX Taxilin Sec10_N Bap31_Bap29_C Mce4_CUP1 T7SS_ESX_EspC FliJ
Other DBs
NCBI-GeneID: 369017
NCBI-ProteinID: NP_899162
RGD: 727894
Ensembl: ENSRNOG00000050420
Vega: OTTRNOG00000001609
UniProt: Q6P6Q2
Position
7:complement(134724840..134730569)
AA seq 576 aa
MSRQSSVSFRSGGSRSFSAASAITPSVSRTTFSSVSRSGGGGGRVSLGGAYGAGGYGSRS
LYNVGGSKRISFSSGGGSFRNQFGAGAGGGYGFGGGAGSGFGFGGGAGSGFGFGGGAGFG
GGYGGAGFPVCPPGGIQEVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASFID
KVRFLEQQNKVLDTKWTLLQEQGTKTIKQNLDPLFEQYINNLRRQLDGVMGERGRLDSEL
RNMQDLVEDYKNKYEDEINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMK
MFFDAELSQMQTHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRTEAESWYQTK
YEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRSEIDNVKKQCANLQNAIAEAEQRGELA
LKDARNKLTELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGE
GVGPVNISVVTNSLSSGYGGRSNIGYGSGLGSGIGGFASDIGPLLNRRGLGSGLSVGGSG
FSASSGQGGGFSSGGGSSSSVKFVSTTSSSRRSFKS
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgtctcgccagtccagtgtgtccttccgaagcgggggcagccgctctttcagcgccgct
tctgccatcaccccatctgtctctcgtaccaccttcagctcggtgtcccgcagtggtggt
ggtggtggcagggtcagccttggtggcgcttacggagccgggggctatggcagccgaagc
ctgtacaatgtggggggctccaaaaggatctccttcagttctggcggaggtagcttcagg
aaccaatttggtgccggtgctggaggcggctatggctttggaggaggagcaggcagtgga
ttcggctttggtggtggagctggcagtggctttggcttcggtggtggagctggctttggt
ggtggctatggtggagctggcttccctgtgtgcccccctggtggcatccaagaggtcacc
gttaaccagaatctcctcacacccctgaacctgcaaatcgatcccaccatccagcgggtc
aggactgaggagagggagcagatcaagaccctcaacaacaagtttgcctccttcatcgac
aaggtgcggttcctggagcagcagaacaaggtcctggacaccaaatggaccctgctgcag
gagcagggcaccaagaccataaagcagaacctggatccgttgtttgaacagtacattaac
aacctccgtagacagctggatggggtcatgggggagaggggccgcctggactcggagctg
aggaacatgcaggatctggtggaggactacaagaacaagtacgaggatgagatcaacaag
cgtaccacggctgagaatgaattcgtgatgttgaagaaggatgtggacgcggcctacatg
aacaaggtggagctagaagctaaggttgatgccctaatggacgagatcaacttcatgaag
atgttctttgatgcggagctgtcccagatgcagacacatgtctctgacacatctgtggtc
ctctccatggacaacaaccgtagcctggacctggacagcatcatcgctgaggtcaaggcc
cagtatgaggacattgccaaccgcagccgaacagaggctgagtcctggtaccagaccaag
tacgaggagctgcagcagacagccggccggcacggagatgacctccgcaacaccaagcat
gagatctcagagatgaaccggatgatccagaggctgagatccgagatcgacaatgtcaag
aagcagtgtgccaacctccagaatgccatcgccgaggctgagcagcgtggggagctggct
ctcaaggatgccagaaacaagctgactgagctggaggaggccctgcagaaggccaagcag
gacatggcccggctgctgcgcgagtaccaggagctcatgaacaccaagctggccctggat
gtggagatcgccacctacaggaagctgctggagggagaggagtgcaggctgagtggagaa
ggagttggaccagtcaacatctctgtcgtcactaacagcctctcttctggctatggagga
agaagcaacattggctatggctctggcttgggcagtggcattggcggttttgcctcagat
atcggcccactcttgaacaggcgcggtttgggtagtgggctcagtgtggggggctccggc
ttcagtgcaagcagtggtcaaggtgggggtttcagcagtggtggtggcagcagctccagt
gtcaaatttgtctccaccacctcctcctcccggaggagcttcaagagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (17)   
   Pfam (17)   
All databases (38)   

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