KEGG   Rattus norvegicus (rat): 373541
Entry
373541            CDS       T01003                                 
Symbol
Taf9
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K14535  transcription initiation factor TFIID subunit 9
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    373541 (Taf9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    373541 (Taf9)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     373541 (Taf9)
   Coactivators
    SAGA/TFTC/STAGA complex
     373541 (Taf9)
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP Histone BDHCT_assoc CENP-T_C LonB_AAA-LID Autophagy_act_C
Other DBs
NCBI-GeneID: 373541
NCBI-ProteinID: NP_001032387
RGD: 727861
Ensembl: ENSRNOG00000039848
Vega: OTTRNOG00000000242
UniProt: Q5BKE0 A6I598
Position
2:33528388..33532395
AA seq 264 aa
MESGKMASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH
AKKPTVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY
CLTAPNYRLKSLQKKAPTPAGRITVPRLSVGSVSSRPSTPTLGTPTPQAMSVSTKVGTPM
SLTGQRFTVQMPASQSPAVKASIPATPAVQNVLINPSLIGSKNILITTNMVSQNTANESA
NALKRKREEEDDDDDDDDDDYDNL
NT seq 795 nt   +upstreamnt  +downstreamnt
atggagtctggcaagatggcgtctcccaagagcatgccgaaagacgcacagatgatggca
caaatcctgaaggatatggggattacagagtatgagccaagagttataaatcagatgctg
gagtttgccttccgatatgtgaccacaattctagatgatgctaaaatttattcaagccat
gctaagaaacctactgttgatgcagatgatgtccgattggcaatccagtgccgtgctgac
cagtctttcacttctcctcccccgagagattttttattagatattgcaaggcaaagaaat
caaacccctttgccattgatcaagccatattcaggtcctagattgccacctgatagatac
tgcttaactgctccaaactataggcttaagtctttacaaaaaaaggcacctactcctgca
ggaagaataacggttccaaggttaagtgttggttcagtttctagtagacctagtactccc
acactaggcacaccaactccacaagccatgtctgtgtcaactaaagtaggcactccaatg
tccctcacagggcagaggtttacagtacagatgcctgcttctcagtcccctgctgtaaaa
gcttccattcctgcaacaccagcagttcagaatgttcttattaatccatcattaattggg
tccaaaaacattcttattactactaatatggtgtcacaaaatacagccaatgagtcggca
aacgcactcaaaagaaaacgtgaagaagaagatgatgacgatgatgatgatgatgatgac
tatgataatttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (22)   
   RefSeq(nuc) (2)   
   GenBank (10)   
   EMBL (10)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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