KEGG   Rattus norvegicus (rat): 406194
Entry
406194            CDS       T01003                                 
Symbol
RT1-T18
Name
(RefSeq) RT1 class Ib, locus T18 precursor
  KO
K06751  MHC class I antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04218  Cellular senescence
rno04514  Cell adhesion molecules
rno04612  Antigen processing and presentation
rno04940  Type I diabetes mellitus
rno05163  Human cytomegalovirus infection
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
rno05320  Autoimmune thyroid disease
rno05330  Allograft rejection
rno05332  Graft-versus-host disease
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    406194 (RT1-T18)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    406194 (RT1-T18)
   04145 Phagosome
    406194 (RT1-T18)
  09143 Cell growth and death
   04218 Cellular senescence
    406194 (RT1-T18)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    406194 (RT1-T18)
   04612 Antigen processing and presentation
    406194 (RT1-T18)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    406194 (RT1-T18)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    406194 (RT1-T18)
   05170 Human immunodeficiency virus 1 infection
    406194 (RT1-T18)
   05168 Herpes simplex virus 1 infection
    406194 (RT1-T18)
   05163 Human cytomegalovirus infection
    406194 (RT1-T18)
   05167 Kaposi sarcoma-associated herpesvirus infection
    406194 (RT1-T18)
   05169 Epstein-Barr virus infection
    406194 (RT1-T18)
   05165 Human papillomavirus infection
    406194 (RT1-T18)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    406194 (RT1-T18)
   05330 Allograft rejection
    406194 (RT1-T18)
   05332 Graft-versus-host disease
    406194 (RT1-T18)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    406194 (RT1-T18)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    406194 (RT1-T18)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    406194 (RT1-T18)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    406194 (RT1-T18)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   406194 (RT1-T18)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Antigens
  406194 (RT1-T18)
SSDB
Motif
Pfam: MHC_I C1-set ig Ig_2 HCV_NS4a
Other DBs
NCBI-GeneID: 406194
NCBI-ProteinID: NP_001002821
RGD: 1303092
UniProt: Q6MFZ7
Position
20:2605478..2614543
AA seq 349 aa
MGNMVPSALLLLLATSPGETQTCSGSHSLRYFYTALSRPAPGESWYIAVGYVDDTQFVRF
NSAGESARYKLRASWVEQEGPEYWQKETEIVTSNAQFFRGNLQTMLDYYNLSHDGSHIIQ
VMYGCDVESDGSLLRGYEQYAYDGRDYITLNEDLKTWTAEDRAAQITRLKWEQAGYAELR
RTYLEGPCKDSLLRYLENRKEMLQCTDPPKAHVSHHPGHEGDVTLRCWALGFYPADITLI
WKKEEEELNQEMELIQTRPAGDGTFQKWAALVVPSGEEQKYTCHVYHEGLPEPLTLRWEP
PQSRMRTRVIVGAVLGAMAILGFMTGGAVMCMRKNKGGDRDYDPAAVTM
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgggaaacatggtgcccagcgccctccttctcctcctggcgacgtcgccaggcgagacc
cagacctgctcagggtcacactctctgcggtatttctacaccgccctgtcccgacctgca
cccggcgagtcctggtacatcgctgtgggctacgtggacgacacacagttcgtgcgcttc
aacagcgcaggggagagtgcgagatataagctacgtgcgtcctgggtggagcaggagggc
cccgagtattggcagaaggagacagagatcgtcacaagcaatgcacagtttttccgagga
aacctacagaccatgcttgactactacaacctgagccacgacggctctcacatcatccag
gtgatgtatggctgtgacgtggaatccgatgggagcctcctccgcggttatgagcagtat
gcctacgatggccgagattacatcaccctcaacgaagatcttaagacttggacagcagag
gacagggcggcgcagatcaccagactcaagtgggagcaggctggttatgcagagctccgc
aggacctacttagagggcccatgcaaggattcgctgctcagatacctagagaatagaaaa
gagatgctgcagtgtacagatcctccaaaggcacatgtgagccatcaccccggacatgaa
ggtgatgtcaccctgaggtgctgggccctgggcttctaccctgctgacatcactctgatc
tggaagaaggaggaggaggaactgaaccaagagatggagcttatacagaccaggcctgca
ggggatgggacttttcagaagtgggcagctctggtggtgccttctggggaggagcagaag
tacacatgtcatgtgtaccatgaggggctacctgagcccctcaccctgagatgggagcct
cctcagtccagaatgcggaccagggtcattgttggtgctgtccttggtgctatggccatc
ttaggttttatgactggaggtgctgtgatgtgcatgagaaagaacaagggaggagacaga
gattatgatcctgctgccgtcacaatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (54)   

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