KEGG   Rattus norvegicus (rat): 406196
Entry
406196            CDS       T01003                                 
Symbol
Cchcr1
Name
(RefSeq) coiled-coil alpha-helical rod protein 1
  KO
K16760  coiled-coil alpha-helical rod protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    406196 (Cchcr1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    406196 (Cchcr1)
SSDB
Motif
Pfam: HCR
Other DBs
NCBI-GeneID: 406196
NCBI-ProteinID: NP_001002822
RGD: 1302992
Ensembl: ENSRNOG00000050233
Vega: OTTRNOG00000001654
UniProt: Q0D2L7 A0A0G2K6P2
Position
20:complement(3210383..3223187)
AA seq 869 aa
MWPHSSGARPWANPLIGNDPEIVTRWCLDGLPNGPTIPWRGLWRLGSLYCVQRVLSCRDR
RHLRRKGNIGDWRQELEDSYNGEMLPPSGFDGLVPPSHFQARPLSTLPRMASTWASNVPL
VQSPPGQDVLERRLDTQRSTVTMWGQDFCGDRQGLGRRGRSLELGVSGALSQQAELISRQ
LQELRLLEEEVRTLRETSLQQKMRLESQAVELDALAVAEKAGQAEAEGLRTALAGAEMVR
KNLEEAKQKELEEIQSLHQEQLSSLTQAHQKALDSLTSKAEDLEKSLNSLEMKQAGEAKQ
LTMAQKEAELLRNQLSKTQEELEAQVTLVENLRKYVGEQVPPEVPSQARELEQKELLDTL
KHLKEDRTNLQATVELLQVRVQSLTHMLALQEEELTRKIHPLDPLEPEFPKKCRSLLRGW
REKVFALMVQLKAQDLQHRDSTKQLRDQVAELQEQVTAQSQEQAILQRALQDKTAQVEVE
RMSTKTLKMELSQAQEARWRQEQQAASAEEQLKFVVSAMNSTQARLQSTMTRVDQAVARI
PSLCNRLSYAVRKVHTIKGLMARKLALVQLRLESCPPPEPAPPPDTDLSLELEQLREERN
RLDAELQLSAHLIQQEVGRVREQGEAEHRHLTEVAQQLEQELQRAQESLASVGQQLEAAR
QGQQESTEEAASLRQELTQQQEIYGQALQEKVAEVESRLREQLSDTKRRLNEARREQAKA
VVSLRQIQHKATLEKERNQELRRLQDEARKEEGQRLTRRVQELERDKNLMLATLKQEGLL
SRYKQQRLLAVLPSGVSKKCSSQPVEPPESAAASPCKESMKGSLTVLLDNLQGLSEAISR
DDAICLEDNQNTKSPPSNPLLGRSCQEEE
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgtggcctcattcttctggggccaggccttgggctaaccctttaataggaaatgaccca
gaaatcgtgactcgatggtgcctagatgggcttcccaacgggcctaccattccgtggcga
ggactgtggagactgggttccctatactgtgttcagagagtcctgagctgcagggaccgt
agacacttaaggaggaaggggaacataggtgactggagacaagagctagaagattcatat
aacggggagatgctgccaccatcaggttttgatgggctggttcctccctcccacttccaa
gctcgacccctctcaaccctgccaagaatggcctcgacctgggcttcaaacgttcccttg
gtccaatctccgcctggccaagatgtcttagagaggcggctagacactcagaggtcgaca
gtgaccatgtggggacaggatttctgtggagacaggcaggggcttgggcggagaggcagg
tctctggagctgggggtctccggtgccctgagccagcaggctgagctgatctctcggcag
ctccaagagttgaggctgctggaggaggaggtccggacccttcgggagacctccctgcag
cagaagatgaggttagagtctcaggccgtggagctggatgctctcgcagtggcggagaag
gccgggcaagccgaggccgagggcctgcgcaccgccttggccggagcggaaatggttcgg
aagaacctggaagaggcgaagcagaaggagctggaggagattcagagtctgcaccaagag
cagctgtcctccctgacacaggctcaccagaaggctctcgacagtctgaccagcaaggct
gaggacttggagaagtctctgaacagcctggaaatgaaacaggcaggggaagccaagcag
ctgactatggcccagaaggaggcagaactgcttaggaatcagctgagtaagacccaagaa
gagctggaggctcaggtgaccttggtggagaatctgaggaagtatgtaggggaacaagtc
cctcctgaggttcctagccaggcacgggagctggaacagaaggagctgctagacaccttg
aagcacttgaaggaggacaggactaaccttcaggccaccgtggagctactgcaggtacgg
gtacagagcctcacacacatgctcgccctgcaagaagaggagctgaccaggaagattcat
cctctagaccccttggagcccgagtttcctaagaagtgccgctcgttgctgcgcggctgg
cgggagaaggtgtttgcccttatggtgcagctcaaagcccaggacctgcagcacagggac
tccaccaagcagctgagggaccaggtagcagagctccaggagcaagtgactgcccaaagc
caggagcaggccatcttgcagcgtgccctacaagacaagactgcacaggtggaggtggag
cggatgagcaccaagaccctgaagatggagctgagtcaggcgcaggaggccaggtggagg
caggagcagcaggcggcctctgctgaggagcagctgaagttcgtggtcagtgctatgaac
agcactcaggccagactccagagcaccatgaccagggtggaccaggctgtagcccggatt
cccagcctctgcaaccggctcagctatgctgtccgtaaggtccacaccattaaaggtttg
atggctcgaaagttggctcttgttcagttgcgcctggagagctgtcccccacctgaacct
gcacccccaccggacacggacctgagccttgagttggagcagctacgggaagaacggaac
cgcttggatgcagaactgcagctaagtgcccacctgatccaacaggaggtgggccgggta
cgggagcaaggagaggcagagcaccggcacctgaccgaagtagcccagcagttggagcag
gagctgcagcgtgcccaggaatccctggctagcgttgggcagcagctggaggcagcccgt
caaggccagcaggagagcacagaggaagctgccagcctccgtcaggagctgacccagcag
caggagatctacgggcaagctctgcaagagaaggtggcggaggtggaaagtcggcttcgg
gaacagctctcagacacaaagaggaggctgaacgaggcccggagggagcaggccaaggct
gtggtttccttgcgccagatccaacacaaagccactctggaaaaggagcggaatcaggag
ctcaggcgcctgcaggacgaggcccggaaggaagaagggcagcggctgacacggcgagtg
caggagctggagagggacaagaacctcatgctggccaccttgaagcaagagggtctcctc
tcccgttacaagcagcagcgcctgttagcagtgcttccctcgggagtgagtaagaagtgc
agctcccagcctgtagagccccctgagtctgcagcagcttcaccgtgcaaggagtctatg
aaaggctccctgactgtcctgcttgataacctgcaaggcctgagcgaggccatctccaga
gacgacgctatttgtctggaagataaccagaacactaagagccctccttccaatccactg
ctgggccggagctgtcaggaggaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (24)   
   UniProt (2)   
   RefSeq(pep) (22)   
DNA sequence (33)   
   RefSeq(nuc) (25)   
   GenBank (4)   
   EMBL (4)   
Protein domain (1)   
   Pfam (1)   
All databases (68)   

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