KEGG   Rattus norvegicus (rat): 406226
Entry
406226            CDS       T01003                                 
Symbol
Krt77
Name
(RefSeq) keratin, type II cytoskeletal 1b
  KO
K07605  type II keratin, basic
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    406226 (Krt77)
   04147 Exosome [BR:rno04147]
    406226 (Krt77)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     406226 (Krt77)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   406226 (Krt77)
  Exosomal proteins of other body fluids (saliva and urine)
   406226 (Krt77)
  Exosomal proteins of colorectal cancer cells
   406226 (Krt77)
  Exosomal proteins of bladder cancer cells
   406226 (Krt77)
SSDB
Motif
Pfam: Filament Keratin_2_head TMCO5 DUF6872 AAA_13 Med9 TPR_MLP1_2 DUF1192 PBDC1 COG6_N Alanine_zipper CENP-F_leu_zip Ribosomal_S6
Other DBs
NCBI-GeneID: 406226
NCBI-ProteinID: NP_001008807
RGD: 1302968
Ensembl: ENSRNOG00000036865
Vega: OTTRNOG00000001617
UniProt: Q6IG01
Position
7:complement(134868416..134880776)
AA seq 579 aa
MSRQFSSQSAFSSRSRRVYSTRSSSGFGGGRQILVSVGQSRRCGGDYGGGFSSRSLYSLG
GSKSIFGGLVGRSASGFCQSRGAGGGFGGGFGGGRSFGGGGFGGGYGGGGRFGGGFGGGF
GTSNFGLGGFGPSYPPGGIHEVTVNQSLLEPLHLEVDPEIQKIKTQEREQIKTLNNKFAS
FIDKVRFLEQQNQVLQTKWELLQQVNTSTRTSSLEPIFEEFINQLQRQVDVLTNEQLRQN
SEIRSMQDIVEDYKNKYEDEINKRTNSENDFVVLKKDVDAAFMAKSDLQSRVDTLYGEIN
FLKYLFDTELSQIQTHVSDTNVILSMDNNRSLDLDSIINAVRTQYELIAQKSKDEAEALY
QTKYQELQITAGKHGDDLKNSKMEISELNRNAQRLQAEIANIKKQIEQMHGSISDAEERG
ERALQDAKQKLQETEEALQQMKEDLARLLRDYQALLGAKLSLDVEIATYRELLEGEESRM
SGALQSQVSISVQSSQVTIGGGGGSGGYGGGSSRGGGGGGGSSRGGGGGTGSRGGGGSGG
GGSYGSSSRSSSKYSGGGSSSRTQILQTSTHTSRRHVVE
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgagccgccagttcagttctcagtctgcatttagctctaggagcaggagggtctatagc
accaggtcttcatcaggctttgggggtgggagacagattctggtgtctgtgggtcagtcg
aggaggtgtggaggtgattatggtggtgggttcagttccaggagtctctatagtctgggt
ggtagtaaaagcatctttgggggcctagtggggcgaagtgccagtggtttctgccagagt
agaggggcaggaggaggattcggaggaggatttgggggaggaagaagctttggtggaggt
ggctttgggggtggctatggtggaggtggcagatttggaggtggttttgggggcggattt
ggcactagcaattttgggcttggtggcttcggtccttcttatcctcccgggggcatccat
gaggtgactgttaaccagagtctcctggagccccttcacctagaagtggatcctgaaatt
cagaagatcaagacccaggagagggagcagatcaagactctcaacaacaagtttgcctcc
ttcatcgacaaggtgcgcttcctggagcagcagaaccaggtgctgcagaccaaatgggag
ctgctgcagcaggtgaacacgtctactcggaccagcagcctggagcccatctttgaggag
ttcatcaatcagctgcagaggcaggtggatgttctgaccaatgagcagttgcgccagaac
tcagagatcaggagcatgcaggatatcgtggaggactacaagaacaagtatgaggatgag
atcaacaaacggaccaattcagagaatgactttgttgttttgaaaaaggacgtggatgct
gctttcatggccaaatcagacttgcagtccagagtggacacgctgtacggggagatcaac
ttcctgaaatatctatttgatacggagctgtcccagatacaaacccatgtcagtgatacc
aatgtcatcttgtcaatggacaataaccgctccttggacttggacagcatcatcaatgca
gtgcgcacccaatatgaattaattgcacagaagagcaaagacgaggctgaggcactgtac
caaaccaagtaccaagagctgcagatcacagctggcaaacatggagatgacctgaagaat
agcaagatggagatctcagagcttaaccgcaatgcccagaggctgcaggcagagatcgcc
aacatcaagaagcagatcgaacagatgcatggatccatttcggatgcagaggagagggga
gaaagagctctccaggacgccaagcagaagctgcaagaaacggaagaggccttgcagcag
atgaaagaggacctggctaggctgctgagagattaccaggcactgctgggtgccaagctg
tccttggatgtggagatcgccacctaccgcgagcttttggagggcgaggagagcaggatg
tcgggggctctgcagagtcaagtgagcatctcggtgcagagtagccaggtgaccattggc
ggcggcggcggctcaggaggttatggcggcggcagttcgcgaggaggcggtggtggcggc
ggcagctcccgcggaggtggaggaggaacaggctcccgcgggggaggcggcagcggaggc
ggcgggagctatggctccagcagcagaagcagcagcaaatacagcggcggtggcagctcc
tcccgcacgcagatactgcagacctccacccacacctcgcgcaggcacgtggtggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (30)   

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