KEGG   Rattus norvegicus (rat): 408217
Entry
408217            CDS       T01003                                 
Symbol
Usp11
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11
  KO
K11835  ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    408217 (Usp11)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    408217 (Usp11)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     408217 (Usp11)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   408217 (Usp11)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    408217 (Usp11)
SSDB
Motif
Pfam: UCH DUSP Ubiquitin_3 UCH_1 USP7_C2 DNA_pol_phi
Other DBs
NCBI-GeneID: 408217
NCBI-ProteinID: NP_001008861
RGD: 1303052
UniProt: Q5D006
Structure
Position
X:complement(4026865..4043036)
AA seq 921 aa
MAAVAADPAAAAVPASAEDRETQPEAMPDLDQQWRQIGNGRERPLRAGESWFLVEKHWYK
QWEAYVKGGDQDASTFPGSINNSGLFEDQISWHLRERLVEGDDYVLLPAPAWNYLVSWYG
LKDDQPPIERKVIELPGIRKVEVYPIELLLVQHSDMETALTIQFSYSDSVDLVLQTAREQ
FLVEPQEDTRLWTKNSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDGTWPSAQLCGM
NNMPDEDEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPL
GMKGELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGL
HEDLNRVKKKEYVELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCG
NVSVTFDPFCYLSVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTH
TSVAPDKMIVADVFSHRFYKLYQLEDPLSGILDRDDIFVYEVTGRIEPVEGSRDDIVVPV
YLRERTPSRDYNNSYYGLILFGHPLLVSVPRDRFSWEGLYNILMYRLSRYVTKPTSDDDD
GDEKGDENEDEDVEDDSSSEEEKEEMSGPTDNDGTQESEQEQAGTSSGVTGRCPSLLDNS
LHTSQWPPRRRRKQLFTLQTVNSNGTSDRTTSPEEAQTQPYIAMDWEPEMKRRYYDEVEA
EGYVKHDCVGYMLKKNPVQLKECIKLFTTVETLEKENPWYCSSCKQHQLATKKLDLWMLP
EVLIIHLKRFSFSKFSREKLDTLVQFPIRDLDFSEFVIKPKNESAPDLYKYDLIAVSNHY
GGMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQDVGRRQSQTAS
SETPTSPASSSTPNSDIMDVN
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggcggcggtcgcagcggacccagctgcagctgccgtcccggcctctgctgaggacaga
gagacacagcccgaggcaatgccagacctggatcaacagtggcgccaaatcgggaatggg
cgagagcgtccactgcgagctggcgaaagctggttccttgtggagaaacactggtataaa
cagtgggaggcgtatgtgaagggaggggatcaagatgctagcacctttcctggcagtatc
aacaattcggggctctttgaagatcagataagctggcacctcagggagagactggtagaa
ggagatgattatgtgctgctcccagcgcctgcttggaactacctggtcagctggtatggc
ttaaaggatgaccagccacctattgagcgcaaggtcatagaacttcctggcattcgaaag
gtggaagtgtacccaatagagctgctgctcgttcagcacagtgatatggaaacagctctc
accattcagtttagctattctgattctgtcgacctagtcttgcaaacagcccgggagcag
tttctggtagagcctcaggaagacacgcgcctctggaccaagaactcagagggctctttg
gatcgattatgtaacacgcagatcacactgcttgatgcctgccttgagactgggcagttg
gtcatcatggagacccgaaacaaagatggcacttggcccagcgctcagctgtgtggcatg
aacaacatgccggacgaggatgaggacttccagggccaaccaggcatctgtggccttacc
aatctgggcaacacgtgcttcatgaactcggccctacagtgcctcagcaatgtgccacag
cttacggagtactttctcaacaaccgctacctggaggagctcaacttccggaaccctctg
ggcatgaagggtgagcttgctgaggcctatgcagatctggtaaagcagacttggtctggc
taccaccgctccattgtgccgaatgttttcaagaacaaggttggccatttcgcatcccag
tttctgggctaccagcagcatgactcacaggaactactgtcattcctcctggatggacta
catgaggacctcaatcgagtcaaaaagaaagaatatgttgagctatgcaatggtgctggg
cggcctgatctggaagtggctcaggaagcctggcagaaccacaaacgacgaaatgattct
gtgattgtggacactttccatggcctcttcaagtctacactggtgtgccctgattgtggc
aatgtttctgtgacctttgaccccttctgctacctcagtgtcccactgcctgtctgctcc
aggagggtcttggaggtcttctttgtccccatggatccccgccgcaagccagaacagcac
cgggttgtagtccctaagaagggcaatatctcagatctgtgtgtggctctgtccacacat
acaagtgttgcaccagataagatgatagtagctgatgtcttcagtcaccgattctataag
ctctaccagctggaggatcctctgagtggcatcttggatcgtgatgatatctttgtatat
gaggtgactggacggattgagcctgttgagggttcaagagatgatattgtggttcctgtt
tacctgcgggagcgcaccccgtccagagactacaacaactcctactacggtctgatactt
tttgggcaccctctcctggtgtcagtgccccgggaccggttctcctgggagggcctatat
aacatcttgatgtaccggctttcacgatatgtgaccaaacccacctcagatgacgatgat
ggggatgagaaaggtgatgagaatgaggatgaggatgtcgaagatgacagcagcagtgaa
gaagaaaaggaggaaatgtctggacctaccgataatgatggtacccaagaatcagagcag
gagcaggctgggaccagctctggggtcaccggaagatgcccatccctcttagacaacagc
ctccacacatcgcagtggcccccaaggcgacgacgaaagcaattgtttactctgcagaca
gtgaactccaatggaaccagtgaccggaccacctcccctgaagaagcccaaactcagccg
tacattgccatggattgggaaccagagatgaagaggcgctattatgatgaagtagaggct
gagggctatgtgaagcatgactgcgtgggatacatgctgaagaagaatccagtgcagctg
aaggagtgcatcaaactcttcaccactgtggaaacccttgagaaggagaacccttggtat
tgctcctcctgcaagcagcaccagctagccactaagaaactggacctctggatgctacct
gaagttctcattatccatctgaagcgtttttcattttccaaattttcccgggagaagctg
gacaccctggtgcagtttcctatccgggatctggatttctctgagtttgtcatcaaacca
aagaatgagtctgctccagacctgtacaaatatgatctcatcgcagtttccaaccattat
ggtggcatgcgtgatggacactatacaacatttgcctgcaacaaggacagtggccagtgg
cactactttgatgacaacagtgtctcacctgtgaatgagaatcagattgagtccaaggca
gcctatgtcttgttctatcaacgccaagatgtgggtcgacgccagtcccagactgcttca
tctgagacccccacctctcctgcttcgagttctacacccaactctgacatcatggatgtc
aactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system