KEGG   Rattus norvegicus (rat): 408223
Entry
408223            CDS       T01003                                 
Symbol
Usp54
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 54
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: UCH UCH_1 EPO_TPO
Other DBs
NCBI-GeneID: 408223
NCBI-ProteinID: NP_001008863
RGD: 1303206
Ensembl: ENSRNOG00000027012
UniProt: Q6IE24
Position
15:3706013..3806935
AA seq 1588 aa
MSWKRNYFSGGRGSVQGMFAPRSSMSIAPSKGLSNEPGQNSCFLNSALQVLWHLDIFRRS
FRQLTSHKCMGDSCIFCALKGIFKQFQCSSEKVLPSDTLRSALAKTFQDEQRFQLGIMDD
AAECFENLLMRIHFHIADETKEDICTAPHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQ
MVHYISTTSLCNQAICMLEKREKPSPGMFGELLQNASTMGDLRDCPSNCGERIRIRRVLM
NAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSELYLVGMICYYG
KHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKGHYQPLLLLYADPQGTPVSAQ
DLPPHAQLLSHTKTCYDSEDSGHLTDSECNQKHTTKKGPLVERRRGSGRIRRKADAPQAS
GYHSEGETLKEKQAPRNASKSSSTSRLKDFKETVSNMIHSRPSLASQTNAASPCVGRAGD
QPDKIPARNLPLHSRGWETESTSSEARSSSSSKYRPTWRPKRESLNIDSIFSKDKRKHCG
YTQLKTFPEDAAKEFAQDEVSNPVANDIKDGGPSSQHKLWGTARPGSHLLEQHPRLIQRM
ESGYESSERNSSSPVSLDAAPPECLNVYRDQSTKRAVGFVPSWRHIPKSHSSSILEVDST
APVTGWTETQPFSDGEITSKSELDELQEEVARRAQEQELRKKREKELEAAKGFNPHPSRY
MDLDELQNQGRSDGFERSLQEANSVFEESLHLEQEGDCAAALALCNEAISKLRLTLHDAS
SSTHSRALVDKKLQISIRKARSLQDRMQQQPPSQQPVQPSASLPSQGGGLPQPTSEQSVP
LQVLLSQQTQLEPCKDSELGATSPFFHSPASCPEPHSSLVSPSPAQSVSQHSPPGTSALK
LLKSFEVDIVNHSAFHRQDLPKATGRTEMNSQHECLPFDALEDRLQGHREDNSCCSKFPP
QEGRDTTQDQLLEGRKTPVDISMGMPWSHSAGGATSERVMHSLNSPSSPSAQPAVPPYGA
CHPIMSAAASPVLHAADPMQKLNQHLQAQSLQTSLASKVVRGSEEPYRPEFPSTKGLVRS
LAEQFQKIRNTSTRDVIGSQDRSLPNGLRKSSSPSDFMLPLSQGPEKEHCRWVNQPPSPD
GRERQPCWEEPAGHPSVSIDSGLPNGEASRRRQPRLAEADIYQGKLPQVTDTRPTELGSS
VSLGTSLPLDSWVNVTRLCDSQVKHRAPGLGVKSSSHDSRTCVTYPERNPILLHPHWNQD
TEQETSELESLYQASLQASSHTGYSDWRSQDVAWQPLSLTGSADGMGRRLHSAPGLDLSK
TPTAEMERILYEPSTVPVSQDSSNVRKKTLETGHHCSSSSSLPVIHDPPVFLLDPKLYPP
QPQFLSPDVLMPSMAGEPYRSPGTSRSVQQFLAMCDRDETPQGVKYTGRTLNYRSLPHRS
RTDASWGPGTETNQHIGARVLTAPACKPQLTYTATLPERHQGLQVPHAQSWGNLFHLPSH
PSAVHPGSPPSSSLHVLHRSSWNSGSVLGSRTPGPRRIDVPPDDDGRQSQYPSQYRHRSA
GEERVRFALSNTAGTEQSRVRLLQHSRW
NT seq 4767 nt   +upstreamnt  +downstreamnt
atgtcttggaaaagaaattacttttctggaggccgaggtagcgttcaaggaatgtttgca
cctcggagctcaatgtctattgcccccagcaaaggcctcagcaatgagccagggcaaaac
agctgcttcctcaatagcgcgctacaggttttgtggcacttggacatcttccgccgcagc
tttcggcagctcacatctcacaagtgcatgggcgattcctgcatcttctgtgcgctcaag
ggcatctttaagcagttccagtgcagtagtgaaaaagtgcttccttctgacactctccgt
agtgctctggcgaagactttccaggatgaacagcgtttccagctggggattatggatgac
gctgcagaatgctttgaaaacctcctgatgagaattcacttccatatcgcggacgaaacc
aaagaggatatatgtactgctccacactgcatttcccaccagaagtttgcgatgacgttg
tttgagcagtgtgtgtgcacgagctgcggtgccacctctgacccactgcccttcatccag
atggtgcactacatctccaccacttccctttgtaaccaggccatttgtatgctggaaaag
cgggagaaaccttcaccgggtatgtttggtgagctgcttcagaatgccagcaccatgggg
gacctgcgggactgtccgagcaactgtggggagagaattcggatccgccgtgtgttgatg
aatgcaccacagattatcacgattgggctggtttgggactcagaccattccgacttggca
gaggatgtcatccacagtctgggcacctgccttaagttgggtgatctgtttttcagagtg
acagatgaccgagccaagcagtcggagctgtacttagtaggaatgatctgttactatggc
aagcattattctacattcttctttcaaaccaagatccgaaaatggatgtattttgatgat
gctcatgtcaaggagattggtccgaagtggaaggacgtggtgaccaaatgcattaaaggg
cactatcagcccttgctgctgctctatgcagatccccagggtacccccgtgtctgcccag
gacctgcctccccacgctcagttgctgtcacacaccaagacatgctacgacagtgaagac
tcaggacacctgactgacagtgaatgtaatcagaaacacacaacgaagaaagggcccctg
gtggagcgcaggagaggctctggccgcattcggaggaaagctgatgccccacaggcctca
ggctatcacagtgaaggagaaacactgaaagagaagcaggctcctaggaatgcctccaaa
tccagcagcaccagcaggctaaaggatttcaaagagacagtcagcaatatgatccacagc
aggccttccttggcttctcagaccaatgcagcatctccctgtgtaggcagggcaggagac
cagccagacaagataccagcaaggaacttacctctacactctcggggctgggaaacggag
agtaccagcagtgaggcaagatccagttcttccagcaaataccgcccaacatggagacct
aaacgagaatccctaaatattgacagcattttcagtaaggacaaaaggaagcattgtggt
tacacccagcttaagacctttcctgaagatgcagctaaagaatttgcacaagatgaagta
agcaatccagttgctaacgatattaaagatggtggaccaagctcacagcataaactctgg
ggaacagccaggccaggctctcatcttttagaacagcatcctcgactaatccagcggatg
gaatctggctatgagagcagcgagaggaacagcagcagccctgtcagtttggatgctgcc
ccgcctgaatgcttgaatgtctacagggatcaaagcacaaagagagctgttgggtttgtt
ccttcttggcgtcatatcccaaagtctcacagcagtagcatcctggaagtggactccaca
gcacccgtgactggctggacagagacccaacctttctcagatggggagatcacctctaaa
agtgagttggatgaacttcaggaagaagtggccaggcgggcccaggaacaggaacttcga
aagaaacgggagaaggaattagaggctgctaaaggctttaatccccatcctagccgatac
atggacttggatgaactacagaatcaggggaggagtgacggctttgaaaggtccttgcaa
gaggcaaattcagtatttgaagagtcgctgcatctggagcaagagggagactgtgctgcc
gctctggctctctgtaacgaagctatctctaaactaagacttaccctgcatgatgccagc
tctagcacgcacagcagagccctagtcgataagaagttgcaaatcagtattcgaaaagct
cgaagcctgcaagatcgcatgcagcagcagccaccatcgcagcagccggtgcagccctca
gcctctctcccatcacaggggggcggcctccctcagccgaccagtgaacagtctgtcccg
ctccaagtactgctaagccagcagacacagctggaaccctgcaaggattcagagctcggc
gccacttcccctttcttccactcacctgcttcctgccctgagccacactcatccctcgtc
tcaccgtcacctgctcagtctgtctctcagcacagtcctcctgggacgtctgccttgaag
ctcctgaagtcttttgaggtggatatcgtcaaccactctgcatttcacaggcaggattta
cctaaagcaacaggtagaactgagatgaattctcaacatgaatgcctgccctttgatgcc
cttgaagataggctccaaggtcacagggaggacaacagctgttgtagcaaattcccaccc
caagaaggaagagacacaactcaagatcagctgttggaaggaaggaagactcctgttgac
atatccatggggatgccttggtcacattcagcaggaggagctacttctgagagagttatg
catagcctaaacagtccttcaagtccatcagctcagcctgctgttcccccctacggtgcc
tgccaccctataatgtctgctgctgcttcacctgtgcttcatgctgctgaccccatgcag
aaacttaaccaacatctccaagcccaaagtctccaaacttcattggcttcaaaagtggtc
agaggcagtgaggagccctataggccagagttccccagtacaaaaggccttgtccgctca
ttggcagagcagttccagaagattcggaatacttccacgagagatgttataggttcccag
gatcgaagtttgccaaatggtctaaggaagagctcttctccttctgactttatgcttcca
ttatcccagggtccagaaaaagaacactgtcgttgggtaaaccagcccccttctccagat
ggcagggaaagacagccctgctgggaagaacctgcagggcatccttctgtttccattgac
tctgggcttcctaatggtgaagcctcgaggagaagacagcccagactggccgaggcagac
atataccaaggaaagctaccccaagtgacagatactaggcccacggagctgggcagtagt
gtcagcttggggacttctttgcctttggattcttgggtaaatgtcacaaggctctgtgat
tctcaagttaaacacagggctcctgggctaggagtcaagtcctcctcccatgattcccgt
acatgtgtaacctatccagaaagaaatcctatccttttgcatccacactggaaccaagac
acagagcaggagacgtctgaactggagtctctctaccaagccagtctccaggcctcctct
catactggctattctgattggaggtcacaggatgtggcctggcagccacttagcctaaca
ggttctgcagatggcatggggaggagactgcactcagcccctggtcttgatctttcaaag
actccaacagcagaaatggagcgcattctttatgaaccgagtacagtgcctgtctctcag
gattcatcaaacgtgaggaaaaagactttggaaaccgggcaccattgttccagctcctct
tccctccctgtcatccatgatcctcctgtatttctccttgatcctaaactctaccctccc
caaccacagttcctgtccccagatgtcctgatgcccagcatggcaggggagccctataga
tccccaggaacttcgaggagtgtccaacagtttctggctatgtgtgacagggatgaaact
ccccaaggggtcaagtacacaggaaggactttgaactaccgaagtctacctcatcgttcc
agaactgatgcttcctggggaccagggacagaaaccaaccagcacattggggccagagtc
ttaactgcgccagcatgcaagcctcagctaacctacactgccacactaccagaaagacac
cagggccttcaggttcctcatgctcagtcctggggcaatcttttccacttaccctcccat
ccttctgctgttcacccagggtccccaccatccagcagtcttcatgtactccataggtca
tcttggaattcgggttctgttctggggtcccgaacacctggtcctcgacgaatagacgtg
cccccagatgatgacgggagacagagccaatacccctctcagtatagacacaggagtgca
ggggaggagagagttaggtttgctctgtcaaacactgcgggcacagagcagagcagggtg
agactgctacagcacagcaggtggtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (32)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (30)   
DNA sequence (50)   
   RefSeq(nuc) (30)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (91)   

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