KEGG   Rattus norvegicus (rat): 414819
Entry
414819            CDS       T01003                                 
Symbol
RT1-CE16
Name
(RefSeq) RT1 class I, locus CE16 precursor
  KO
K06751  MHC class I antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04218  Cellular senescence
rno04514  Cell adhesion molecules
rno04612  Antigen processing and presentation
rno04940  Type I diabetes mellitus
rno05163  Human cytomegalovirus infection
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
rno05320  Autoimmune thyroid disease
rno05330  Allograft rejection
rno05332  Graft-versus-host disease
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    414819 (RT1-CE16)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    414819 (RT1-CE16)
   04145 Phagosome
    414819 (RT1-CE16)
  09143 Cell growth and death
   04218 Cellular senescence
    414819 (RT1-CE16)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    414819 (RT1-CE16)
   04612 Antigen processing and presentation
    414819 (RT1-CE16)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    414819 (RT1-CE16)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    414819 (RT1-CE16)
   05170 Human immunodeficiency virus 1 infection
    414819 (RT1-CE16)
   05168 Herpes simplex virus 1 infection
    414819 (RT1-CE16)
   05163 Human cytomegalovirus infection
    414819 (RT1-CE16)
   05167 Kaposi sarcoma-associated herpesvirus infection
    414819 (RT1-CE16)
   05169 Epstein-Barr virus infection
    414819 (RT1-CE16)
   05165 Human papillomavirus infection
    414819 (RT1-CE16)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    414819 (RT1-CE16)
   05330 Allograft rejection
    414819 (RT1-CE16)
   05332 Graft-versus-host disease
    414819 (RT1-CE16)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    414819 (RT1-CE16)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    414819 (RT1-CE16)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    414819 (RT1-CE16)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    414819 (RT1-CE16)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   414819 (RT1-CE16)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Antigens
  414819 (RT1-CE16)
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_C ig Psg1 C2-set_2 PRD1_DD DAG1 Shisa TMEM154 Protocadherin
Other DBs
NCBI-GeneID: 414819
NCBI-ProteinID: NP_001008839
RGD: 1359403
Ensembl: ENSRNOG00000065254
UniProt: A0A2P1NRY6 Q6MG28
Position
20:complement(3261656..3265548)
AA seq 370 aa
MGAMAPRTLLLLLAAALAPTQTRAGSHSLRYFVTAISGPGLGEPRFMEVGYVDGTEFVRY
DSDAKNPGMEPRARWMEREGREYWERETRRVKENEQLFRGNLRTLLGYYNQSEGGSHTIQ
WMSGCDVGSDGSLLRGYDQFAYDGRDYIVLNEDLKTWTAADTAARITRNKWDRAGVAERH
KAYLEGKCLESLLRYLELGKETLLRSDPPKAHVTLHPRPEGDVTLRCWALGFYPAGISLT
WQLNGEDLTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCLVEHEGLPEPLTQRWEP
SPSTDSNMETYVIYVILGAVAIIAAVIIVAVVAVVMKRRRNTGGKVGVYAPAPSRDSSES
SDVSLSDCKA
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgggggcgatggcaccgcgcacgctgctcctgctgctggcggccgccctggccccgacg
cagactcgcgcgggctcacactcgctgcggtatttcgtcaccgccatatccgggcccggc
ctcggggagccccgattcatggaagtcggctacgtggacggcacggagttcgtgcgctac
gacagcgacgcaaagaatccggggatggagccgcgggcgaggtggatggagcgggagggg
cgggagtattgggagcgggagacacggagagtcaaggaaaacgagcagttgttccgaggg
aacctgaggaccctgcttggctactacaaccagagcgagggcggctctcacaccatccag
tggatgtctggctgtgacgtggggtcggacgggagcctcctccgcgggtatgatcagttc
gcctacgacggccgcgattacatcgtcctgaacgaagacctgaaaacgtggacggcggcg
gacacggcggcacggatcacccggaacaagtgggatcgggctggtgttgcagagagacac
aaggcctacctggagggcaagtgcttggagtcgctcctcagatacctggagctcgggaag
gagacgctgctgcgctcagatcccccaaaggcacatgtgacccttcaccccagacctgaa
ggtgatgtcaccctgaggtgctgggccctgggcttctaccctgctggcatctccctgacc
tggcagttgaatggggaggacctgacccaggacatggagcttgtggagaccaggcctgca
ggggatggaaccttccaaaagtgggcatctgtggtggtgcctcttgggaaggagcagaat
tacacatgccttgtggagcatgaggggctgcctgagccgcttacccagagatgggagcct
tctccatcgaccgactccaacatggaaacctatgtcatttatgtcatccttggagctgtg
gccatcattgcagctgtgatcattgtagctgtggtggctgttgtgatgaagaggaggaga
aacacaggtggaaaagtaggagtctacgcccctgctccaagcagggacagctctgagagc
tctgatgtgtctctctcagattgtaaagcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (24)   
   RefSeq(nuc) (4)   
   GenBank (10)   
   EMBL (10)   
Protein domain (11)   
   Pfam (11)   
All databases (69)   

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