KEGG   Rattus norvegicus (rat): 432367
Entry
432367            CDS       T01003                                 
Symbol
Npc1l1
Name
(RefSeq) NPC1-like intracellular cholesterol transporter 1 precursor
  KO
K14461  Niemann-Pick C1-like protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04975  Fat digestion and absorption
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09154 Digestive system
   04975 Fat digestion and absorption
    432367 (Npc1l1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    432367 (Npc1l1)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC65: NPC-type cholesterol transporter
   432367 (Npc1l1)
SSDB
Motif
Pfam: Patched NPC1_N Sterol-sensing MMPL Folate_rec DUF6196
Other DBs
NCBI-GeneID: 432367
NCBI-ProteinID: NP_001002025
RGD: 1303135
Ensembl: ENSRNOG00000049955
UniProt: Q6T3U3 A6IKS2
Structure
Position
14:complement(81071448..81091113)
AA seq 1331 aa
MAAAWLGWLLWALLLSAAQGELYTPKHEAGVCTFYEECGKNPELSGGLTSLSNVSCLSNT
PARHVTGEHLALLQRICPRLYNGPNTTFACCSTKQLLSLESSMSITKALLTRCPACSDNF
VSLHCHNTCSPDQSLFINVTRVVERGAGEPPAVVAYEAFYQRSFAEKAYESCSQVRIPAA
ASLAVGSMCGVYGSALCNAQRWLNFQGDTGNGLAPLDITFHLLEPGQALPDGIQPLNGKI
APCNESQGDDSAVCSCQDCAASCPVIPPPEALRPSFYMGRMPGWLALIIIFTAVFVLLSA
VLVRLRVVSNRNKNKAEGPQEAPKLPHKHKLSPHTILGRFFQNWGTRVASWPLTVLALSF
IVVIALAAGLTFIELTTDPVELWSAPKSQARKEKSFHDEHFGPFFRTNQIFVTARNRSSY
KYDSLLLGSKNFSGILSLDFLLELLELQERLRHLQVWSPEAERNISLQDICYAPLNPYNT
SLSDCCVNSLLQYFQNNRTLLMLTANQTLNGQTSLVDWKDHFLYCANAPLTFKDGTSLAL
SCMADYGAPVFPFLAVGGYQGTDYSEAEALIITFSLNNYPADDPRMAQAKLWEEAFLKEM
ESFQRNTSDKFQVAFSAERSLEDEINRTTIQDLPVFAVSYIIVFLYISLALGSYSRCSRV
AVESKATLGLGGVIVVLGAVLAAMGFYSYLGVPSSLVIIQVVPFLVLAVGADNIFIFVLE
YQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGALTPMPAVRTFALTSGLAI
ILDFLLQMTAFVALLSLDSKRQEASRPDVLCCFSTRKLPPPKEKEGLLLRFFRKIYAPFL
LHRFIRPVVMLLFLTLFGANLYLMCNINVGLDQELALPKDSYLIDYFLFLNRYLEVGPPV
YFVTTSGFNFSSEAGMNATCSSAGCKSFSLTQKIQYASEFPDQSYVAIAASSWVDDFIDW
LTPSSSCCRLYIRGPHKDEFCPSTDTSFNCLKNCMNRTLGPVRPTAEQFHKYLPWFLNDP
PNIRCPKGGLAAYRTSVNLSSDGQVIASQFMAYHKPLRNSQDFTEALRASRLLAANITAD
LRKVPGTDPNFEVFPYTISNVFYQQYLTVLPEGIFTLALCFVPTFVVCYLLLGLDMCSGI
LNLLSIIMILVDTIGLMAVWGISYNAVSLINLVTAVGMSVEFVSHITRSFAVSTKPTRLE
RAKDATVFMGSAVFAGVAMTNFPGILILGFAQAQLIQIFFFRLNLLITLLGLLHGLVFLP
VVLSYLGPDVNQALVQEEKLASEAAVAPEPSCPQYPSPADADANVNYGFAPELAHGANAA
RSSLPKSDQKF
NT seq 3996 nt   +upstreamnt  +downstreamnt
atggcagctgcctggctgggatggctgctctgggccctgctcctgagcgcggcccagggt
gagctatacacacccaaacacgaagctggggtctgcaccttttacgaagagtgcgggaaa
aacccagagctctctggaggcctcacgtcactatccaatgtatcctgcctgtctaacacc
ccggcccgccacgtcacgggtgaacacctggctcttctccagcgcatctgtccccgcctg
tacaacggccccaataccacttttgcctgttgctctaccaagcagctgctgtccttagaa
agcagcatgtccatcaccaaggcccttctcacgcgctgcccggcctgctctgacaatttt
gtgagcttacactgccacaacacttgcagccctgaccagagcctcttcatcaacgtcacc
cgggtggttgagcggggcgctggagagcctcctgccgtggtggcctatgaggccttttat
cagcgcagctttgctgagaaggcctatgagtcctgcagccaggtgcgcatccctgcggcc
gcttccttggccgtgggcagcatgtgtggagtgtatggctccgccctctgcaatgctcag
cgctggctcaacttccaaggagacacagggaatggcctggctccgctggatatcaccttc
cacctcttggagcctggccaggccctaccggatgggatccagccactgaatgggaagatc
gcaccctgcaacgagtctcagggtgatgactcagcagtctgctcctgccaggactgtgcg
gcgtcctgccctgtcatccctccgcccgaggccttgcgcccttccttctacatgggtcgc
atgccaggctggctggccctcatcatcatcttcactgctgtctttgtgttgctctctgca
gtccttgtgcgtctccgagtggtttccaacaggaacaagaacaaggcagaaggcccccag
gaagcccccaaactccctcataagcacaaactctcaccccataccatcctgggccggttc
ttccagaactggggcacaagggtggcctcgtggccactcaccgtcttagcactgtccttc
atcgttgtgatagccttagcagcaggcctgacctttattgaactcaccacagaccctgtg
gaactgtggtcggcccccaagagccaggcccggaaagagaagtctttccatgatgagcat
ttcggccccttctttcgaaccaaccagattttcgtgacagctcggaacaggtccagctac
aagtacgactccctactgctagggtccaagaacttcagtgggatcctgtccctggacttc
ctgctggagctgctggagcttcaggagaggcttcgacacctgcaagtgtggtcccctgag
gcagagcgcaacatctccctccaggacatctgctatgcccccctcaacccatataacacc
agcctctccgactgctgtgtcaacagcctccttcagtacttccagaacaaccgcaccctc
ctgatgctcacggccaaccagactctgaatggccagacctccctggtggactggaaggac
catttcctctactgtgcaaatgcccctctcacgttcaaagatggcacgtctctggccctg
agctgcatggctgactacggggctcctgtcttccccttccttgctgttgggggataccaa
ggcacggactattccgaggcagaagcgctgatcataaccttctctctcaataactacccc
gctgatgatccccgcatggcccaggccaagctctgggaggaggctttcttgaaggaaatg
gaatccttccagaggaacacaagtgacaagttccaggttgcgttctcagctgagcgctct
ctggaggatgagatcaaccgcaccaccatccaggacctgcctgtctttgccgtcagctac
attatcgtcttcctgtacatctccctggccctgggcagctactccagatgcagccgagta
gcggtggagtccaaggctactctgggcctaggtggggtgattgttgtgctgggagcagtt
ctggctgccatgggcttctactcctacctgggtgtcccctcttctctggttatcatccaa
gtggtacctttcctggtgctagctgtgggagctgacaacatcttcatctttgttcttgag
taccagaggctacctaggatgcctggggaacagcgagaggctcacattggccgcaccctg
ggcagtgtggcccccagcatgctgctgtgcagcctctctgaggccatctgcttctttcta
ggggccctgacccccatgccagctgtgaggaccttcgccttgacctctggcttagcaatt
atcctcgacttcctgctccagatgactgcctttgtggccctgctctccctggatagcaag
aggcaggaggcctctcgcccggatgtcttatgctgcttttcaacccggaagctgccccca
cctaaagaaaaagaaggcctcttactccgcttcttccgcaagatatacgctcctttcctg
ctgcacagattcatccgccctgttgtgatgctgctgtttctgaccctgtttggagcaaat
ctctacttaatgtgcaacatcaacgtggggctagaccaggagctggctctgcccaaggac
tcgtacttgatagactacttcctctttctgaaccgataccttgaagtggggcctccagtg
tactttgtcaccacctcgggcttcaacttctccagcgaggcaggcatgaacgccacttgc
tctagcgcaggctgtaagagcttctccctaacccagaaaatccagtatgccagtgaattc
cctgaccagtcttacgtggctattgctgcatcctcctgggtagatgacttcatcgactgg
ctgaccccgtcctcctcctgctgtcgcctttatatacgtggcccccataaggatgagttc
tgtccctcaacggatacttccttcaactgcttaaaaaactgcatgaaccgcactctgggt
cctgtgaggcccacagcggaacagtttcataagtacctgccctggttcctgaatgatccg
cccaatatcagatgtcccaaagggggtctagcagcgtatagaacgtctgtgaatttgagc
tcagatggccaggttatagcctcccagttcatggcctaccacaagcccttaaggaactca
caggacttcacagaagctctccgggcgtcccggttgctagcagccaacatcacagctgac
ctacggaaggtgcctgggacagatccaaactttgaggtcttcccttacacgatctccaac
gtgttctaccagcaatacctgacggtccttcctgagggaatcttcacccttgctctttgc
tttgtgcccacctttgttgtctgctacctcctactgggcctggacatgtgctcagggatc
ctcaacctactctccatcattatgattctcgtggacaccattggcctcatggctgtgtgg
ggtatcagctataatgcggtatccctcatcaaccttgtcacggcagtgggcatgtctgtg
gagtttgtgtcccacatcactcggtcctttgctgtaagcaccaagcctacccggctggag
agggctaaagatgctactgtcttcatgggcagtgcggtgtttgctggagtggccatgacc
aacttcccaggcatcctcatcttgggctttgcccaagcccagcttattcagatcttcttc
ttccgcctcaaccttctgatcaccttgctgggtctgctgcatggcctggtcttcctgccg
gttgtcctcagctatctgggaccagatgttaaccaagctctggtacaggaggagaaacta
gccagcgaggcagcagtggccccagagccttcttgcccacagtacccctcccctgctgat
gcggatgccaatgttaactacggctttgccccagaacttgcccacggagctaatgctgct
agaagctctttgcccaaaagtgaccaaaagttctaa

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