KEGG   Rattus norvegicus (rat): 450231
Entry
450231            CDS       T01003                                 
Symbol
Krt42
Name
(RefSeq) keratin, type I cytoskeletal 42
  KO
K07604  type I keratin, acidic
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04915  Estrogen signaling pathway
rno05150  Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09152 Endocrine system
   04915 Estrogen signaling pathway
    450231 (Krt42)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    450231 (Krt42)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    450231 (Krt42)
   04147 Exosome [BR:rno04147]
    450231 (Krt42)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     450231 (Krt42)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   450231 (Krt42)
  Exosomal proteins of other body fluids (saliva and urine)
   450231 (Krt42)
  Exosomal proteins of colorectal cancer cells
   450231 (Krt42)
  Exosomal proteins of melanoma cells
   450231 (Krt42)
SSDB
Motif
Pfam: Filament TPR_MLP1_2 FliD_C Myosin_tail_1 Bacillus_HBL DUF1664 DUF4407
Other DBs
NCBI-GeneID: 450231
NCBI-ProteinID: NP_001008816
RGD: 1359182
Ensembl: ENSRNOG00000034087
Vega: OTTRNOG00000000217
UniProt: Q6IFU7 A6HJ21
Position
10:complement(85685560..85741475)
AA seq 452 aa
MASTTSIRQFSTSGSVKGLCAPGMGFSRMSSVRIGGACRAPSLLGGGSCSNMSVTSSRFS
AGLGGSYGGGYTCSLGGGFGSSFGVSDALLGGSEKETMQNLNDRLATYLDRVRALEEANT
DLEVKIREWYKKQGPGPARDYSPYFKTIEDLRNKILAATIDNASIVLQIDNARLAADDFR
TKYETELNLRMSVEADINGLRRVLDELTLARADLEMQIETLKEELAYLKKNHEEEMNALR
GQVGGDVNVEMDAAPGVDLSRILNEMRDQYEKMAEKNRKDAEEWFFTKTEELNREVATNT
EALQSSRTEITELRRSVQNLEIELQSQLSMKASLENSLAETEARYGAQLAQLQGLISSME
QQLCELRCDMERQNHEYQVLLDVKTRLEQEIATYRRLLEGEDAHLATQYSSSLASQASRE
GTVTSRQVRTIVEEVQDGKVVSSREQVHRSTH
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcttccactaccagcatccgccaattttcaacctccggctccgttaagggcctttgc
gctcctggcatggggttctcccggatgtcctccgtccgcattgggggtgcctgccgggct
cccagtcttttgggaggtggcagctgtagcaatatgtcggtcacctcctcccgattctca
gcgggcttaggaggcagctacggtggtggctacacttgcagcctgggagggggctttggc
tctagttttggtgtgtcggatgcccttcttgggggcagcgagaaggagaccatgcagaac
ctcaacgaccggctggccacctacttagacagggtgcgcgccctggaggaggccaacact
gacctggaggtgaagatccgtgagtggtataagaagcagggcccagggcctgctcgtgat
tacagcccctacttcaagaccatagaggacctgcggaacaagatcctggcagccacaatc
gacaatgccagcatcgtgctgcagatcgacaatgctcgcctggcagccgatgacttccgc
accaagtatgagacagagctgaatctgcgcatgagtgtggaggcggacatcaacggccta
cgccgggtgctggatgagctgaccctggccagagctgacctggagatgcagatcgagacc
ctcaaggaggagttggcctacctgaagaagaaccatgaggaggagatgaatgcccttcgt
ggccaggtgggcggggacgtcaacgtggagatggatgcggcccctggtgtggacctgagc
cgcatcctgaacgagatgcgggatcagtacgagaagatggcagagaagaaccgcaaggat
gccgaggagtggttcttcaccaagacagaggagctgaaccgagaagtggccaccaacaca
gaggccctgcagagcagccggacggagatcacggagctccgccgctctgtgcagaacttg
gagattgagctgcagtcccagctcagcatgaaagcatcgctggagaacagcctggcagag
acagaggcacgttatggggcgcagctggcgcagctgcagggcctcattagcagcatggag
cagcagctgtgtgagctgcgttgtgacatggaaaggcagaatcatgagtaccaggtgctg
ctggatgtgaagaccaggctggagcaggagatcgccacttaccgccgcctgctggaggga
gaggatgcccacctggctactcaatattcctcatccctggcttcgcaggcctcccgagaa
ggcacggtgaccagccgccaggtgcgcaccattgtggaagaagtccaggatggcaaggtg
gtctcctccagggagcaggtgcaccgctccacccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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