KEGG   Rattus norvegicus (rat): 494338
Entry
494338            CDS       T01003                                 
Symbol
Trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04064  NF-kappa B signaling pathway
rno04622  RIG-I-like receptor signaling pathway
rno05164  Influenza A
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    494338 (Trim25)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    494338 (Trim25)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    494338 (Trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    494338 (Trim25)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     494338 (Trim25)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    494338 (Trim25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-C3HC4_3 U-box AHH
Other DBs
NCBI-GeneID: 494338
NCBI-ProteinID: NP_001009536
RGD: 1594396
Ensembl: ENSRNOG00000002341
UniProt: Q6P7B3
Position
10:74310024..74328473
AA seq 643 aa
MAELFPLAEELSCSICLEPFKEPVTTPCGHNFCRSCLNETWVVQGPPYRCPQCRTVYQVR
PQLHKNTVLCAVVEQFLQAEQARTPVDDWIPPTRSAASSSDTQVSCDHCLKEVAVKTCLV
CMASFCQEHLRPHIDSPAFQDHPLQPPVRDLLRRKCSRHNRLREMFCPEHGECICHICLV
EHKTCSPTILSQASADLENKLRQKLTIMYSHINGASKALEDVKSKQQNVQESMKRKMLQL
RQEYLEMKAVIDAAETSSTHKLKEEEKRVYGKLDTIYQVLLKKKNEMQNLKAEVELILAK
GDEFEFLEKAAKLQEVSTKPVYIPKIDLDHDLIKGVYQGALDLKSELKLSLKQLQEKKAE
EPCNSGNVGDHAQSTSKPTRPAKKTAPDKKTKKTPGAAGAAGAAGAAGAAGPTSYSSSSN
KLPTFGAPGQATIPDATLKPNAPQPNSAAVKAKVLENFLTMSRTELLEYFVKVVFDYNTA
HNKVALADNYTTASVADGLQHYRSHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGV
GVCYGSMDRQGPESRLGRNPSSWCVEWFNNKISAWHNNMEKTLPSTKATRVGVLLNCDHG
FVIFFAVTEKVYLMYKFKVDFTEALYPAFWVFSAGTTLSICSK
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggccgagctgtttcctctggccgaggagctgtcgtgctccatctgcctggagcccttc
aaggagcccgtcaccaccccgtgcggccacaatttctgcaggtcatgcctaaatgagacg
tgggtcgtccagggcccgccgtaccggtgcccgcagtgtcgcaccgtgtaccaggtgcgc
ccgcagctgcacaagaacacggtgctgtgcgcagtggtcgagcagtttcttcaggccgag
caggcgcggacccccgtggacgactggatcccgcctacccgctccgccgcatccagctca
gacacccaggtgtcctgcgaccactgcctgaaggaggtcgcggtgaagacgtgcctcgtg
tgcatggcctctttctgccaggagcacttgcggcctcacatcgacagtccggccttccag
gaccaccccctgcagccacccgtccgtgacctgctgcgccgcaaatgttccaggcacaac
cgccttcgcgaaatgttttgtcctgagcacggagagtgcatctgccatatctgcctggta
gagcacaagacctgctcccctacgatcctaagccaggccagcgccgacctggagaacaaa
ctgaggcaaaaactcaccatcatgtacagccacatcaatggagcgagcaaagcactggag
gatgtgaaatccaagcagcagaatgtgcaggagtctatgaagaggaagatgctacagctg
agacaggaatatttggaaatgaaggctgtcatcgatgccgcagagaccagctccacgcac
aagttgaaggaggaggagaagagagtctatggaaagctcgataccatctaccaggttctt
ctcaagaagaagaacgagatgcagaatctgaaggcagaggttgagctcatcctggccaaa
ggggacgagtttgagtttctggagaaagctgcaaaattgcaggaagtgtcaacgaaacca
gtctacatccctaagatagacctggaccatgatttgataaagggggtctaccagggtgca
ttggacctcaagagtgagctgaagctctccctcaagcagctacaggaaaagaaggctgag
gagccctgcaactcaggtaacgtgggagaccatgcgcagtccacatccaaacccacacgc
cctgcgaagaagaccgcaccggacaagaagaccaagaaaacccctggtgctgcgggtgct
gccggtgctgccggtgctgctggtgctgccggtcctacctcctactcttcctcatctaac
aagttgcccacctttggagctcctggacaagcaactatccctgatgccacactcaaaccc
aatgctccacaaccaaactcggcagccgtcaaggctaaggtgttagaaaacttcttaacc
atgtccagaacagagcttctggaatatttcgttaaagtcgtcttcgactacaataccgcc
cacaacaaagtggctctggcagacaactacaccaccgcttccgtggccgacgggctgcag
cactaccggtcccatccccagaggttcacctactgctctcaggtcctggggctgcactgc
tataagaaaggcatccactactgggaggtggagctgcagaagaacaacttctgtggtgta
ggcgtctgctatggcagcatggatcggcagggccccgagagccggctgggccgtaacccc
agctcatggtgtgtggagtggttcaataacaagatctccgcctggcacaacaacatggag
aaaacgctgccctccaccaaggccacgcgagtcggcgtgctactcaactgtgaccatggc
tttgtcattttctttgctgtcaccgaaaaggtgtatctgatgtacaagttcaaggtggac
tttactgaagctctgtacccagccttttgggtgttctctgcgggtaccaccctctctatc
tgctccaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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