KEGG   Rattus norvegicus (rat): 498119
Entry
498119            CDS       T01003                                 
Symbol
Spidr
Name
(RefSeq) DNA repair-scaffolding protein
  KO
K22806  DNA repair-scaffolding protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    498119 (Spidr)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     498119 (Spidr)
SSDB
Motif
Pfam: DUF4503 DUF4502
Other DBs
NCBI-GeneID: 498119
NCBI-ProteinID: NP_001094458
RGD: 1566036
Ensembl: ENSRNOG00000037851
UniProt: A2VD15
Position
11:complement(98270779..98511760)
AA seq 878 aa
MSGTRRPGVSKRKRSWCIEHPFFLEERSQQLRRANFKTVKATDSLSKAWLKCGEGFQDTS
ETLPLASEKTDITEKNLELPPRPKTDELHVIDWEINSDTEDPGGPSECEDDEGALDISDC
ASFASGHSLTSDDSLPEPPEQISTEILEYSSDSEREDDSEHALFIDSESPHKYQVEFKSD
VRQFLDNQTDSGANSAEPTLKTPHKYTAKFSKTPENSTTKKKFLRGRLAERLQELQNRER
SAISLWRHRCVAYQMTPLGRKSGVLTVKILELHEECTMQVAVCEQLAGPPITSAPRGTAT
RPGAYLKVLFTRETANHLMGQPQDIIYIFPPWQKLLIPNGSFSIILNTYFCQKAIAKETV
HEDLYSQDTSLPRRNITLAQRFRIKGITNSSSSSQTGYDTLATTGTDWTHGHDKAEQHLI
VGAPLRDSLLDIVESQRAGPWSGVRVRVVVQRVYSLLSRDGARSQHRLTGEHAGSPGAWS
CLLVQDACGMFGEVYLNSTLWKDRQLEGRSCSMSGVKVLQKATRGRTPGLFSLIDSLWPP
VIPLNKPSCDEPSGETKTYLPPPVFCYIFSAHPNLEQIDAIEGDTISKLYKPPVVHCLKE
ILQTNEHGTRCSFYARVIYQKPQLKNLLAQKEIWLVVTDITLQIQDERDHSLPKTLPVYI
APSCVLGPEVVEELARPASHTLLFRDTLRDNGQIVCIERTVLIPQKLLLCVPSSCDLPGP
VTVDELSLLTPVNSICSVQGTVVDIDESTAFSWPVCDQCGNGRLEQKPEDGGSFSCGDCS
QLVLSPLQKRQLHVFLDCPTRPESTVKVKLLESSISLLLMSAAFKDGNYEVENILGKEMG
PLLCFVQSVTTQQTSCITLEEIELLSTAGATAAPPPPP
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgtctggaacccgccgccccggcgtgtccaagaggaaaaggagttggtgtatagaacac
ccattttttctagaagagaggtcacagcagttgagaagggcaaatttcaagacagtgaaa
gcaactgactctctctctaaagcatggctcaagtgtggagaaggatttcaggacacctct
gagaccctgccattagcaagcgaaaagacagatattactgaaaagaacctggaattacct
ccaagaccaaagacagatgaattacatgttattgactgggagattaacagtgacacagaa
gatcctggtgggcctagtgagtgtgaagatgatgagggagccctggacatttcagactgt
gcttcttttgcaagtggtcattctctgacaagtgatgacagcctacctgagccccctgag
caaatttctacagaaattttggagtattcatcagatagtgaaagagaagatgactcagag
catgccctgttcattgattcagaatcgcctcacaaataccaggtggaatttaaatcagat
gtaagacagtttttggataatcagactgactcaggagcaaattcagctgagcccacattg
aaaacaccccataaatatacggccaagttttcaaagactccagaaaattcaacaacaaag
aagaagtttttaagaggtcgactagcagaacgactccaagaactacagaatcgagagaga
tctgccatttcattgtggagacatcgatgtgttgcttaccaaatgacaccattaggcaga
aaatctggtgtattaactgtgaaaattctagaactacatgaagaatgcaccatgcaagtt
gcagtatgtgagcagttagcagggccgccaatcaccagcgctcctagaggaacagctact
agacctggagcctacctgaaggttctctttaccagagaaactgcaaatcacttaatgggg
cagccccaggacatcatttacatcttccctccttggcaaaaacttcttatcccaaatgga
agtttctctattattctaaatacttatttttgtcagaaagctattgcaaaagaaacagtg
catgaagacctgtacagtcaggacacatctcttccaaggagaaatataactttggcccag
aggtttagaatcaagggcataacaaacagttcatccagcagccagactggatatgatacc
ctggccaccactggcacagactggacccacggacatgacaaggcagagcaacatcttatc
gttggtgctcccctgagggattctcttctggacattgtggaaagccaaagagctggccca
tggtctggggtcagggtccgagtagtagtgcagagagtttactctcttctcagcagagat
ggtgccaggagccaacacaggctcacaggggagcatgcaggatcacctggagcatggtcc
tgccttctagtgcaggatgcctgtgggatgttcggggaagtgtacttgaacagcaccctc
tggaaggacagacagttagaagggaggtcctgcagcatgtcgggagtgaaggttctacag
aaagctacaagaggaaggacaccagggctcttcagtttaattgacagtctgtggccccca
gtgatacctctgaacaagccttcctgtgacgagcccagtggagagacaaagacttatctg
cctcctcctgtcttctgttatatcttctctgcacatccaaatctggaacaaattgatgca
attgaaggagacaccatttccaagctttacaagcctccagttgtccactgtttaaaagaa
atcctccagactaatgaacatggtacacgttgcagcttctatgccagagtgatttatcaa
aagccacagctaaagaatcttttggcacaaaaggaaatctggctggtggtgactgacatt
accctacaaatacaagatgaaagggaccactctcttcccaaaaccctgccagtctatata
gccccctcatgtgtgctgggcccagaggttgtagaagaacttgccaggccggcatctcac
accttacttttcagggatactcttcgagacaatggtcagattgtttgtattgaacggaca
gtcctcataccccagaaacttctcttgtgtgtaccttcttcctgtgacttgcctggccca
gtgacagtagatgaactaagcctcctcacacctgtcaactccatttgcagtgtgcaaggt
accgtggttgatatagatgagagcactgctttctcatggcctgtgtgtgaccagtgtggc
aatgggagattggaacagaagccagaagatggaggctccttctcctgtggggactgttcc
caactggtcctgtcacctcttcaaaagagacagctgcatgtctttctggactgccccaca
agacctgagagtactgtgaaggtcaagctgttggagagcagtatttctttacttctgatg
tccgctgctttcaaggatgggaattatgaagtagagaacatccttgggaaggagatggga
ccgttactctgctttgtccagtccgtcactacacagcagaccagctgcatcactctggaa
gagattgagcttctgagtacagcgggagccactgctgctccgcctcctcctccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (19)   
   UniProt (1)   
   RefSeq(pep) (18)   
DNA sequence (20)   
   RefSeq(nuc) (18)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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