KEGG   Rattus norvegicus (rat): 498160
Entry
498160            CDS       T01003                                 
Symbol
Zkscan1
Name
(RefSeq) zinc finger protein with KRAB and SCAN domains 1
  KO
K09229  KRAB and SCAN domains-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    498160 (Zkscan1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    498160 (Zkscan1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 SCAN zf-C2H2_4 zf-C2H2_6 KRAB Zn-ribbon_8 zf-C2H2_11 GATA MRP-S23 DUF5830
Other DBs
NCBI-GeneID: 498160
NCBI-ProteinID: NP_001020931
RGD: 1560616
Ensembl: ENSRNOG00000001335
UniProt: Q4KLI1 A6KSS2
Position
12:22080319..22101389
AA seq 562 aa
MMTAESREATGLSPQAAQEKDGIVIVKVEEEDEEDHMWGQDASLQETPPPDPEVFRQRFR
RFCYQNTFGPREALNRLKELCHQWLRPEVNTKEQILELLVLEQFLSILPKELQVWLQEYR
PDSGEEAVTLLEDLELDLSGQQVPGQVHGPEMLARGVVPLDPVQESSSFDHHEAAQSHFK
HSSRKPRLLSPRALPATHVPAPQHEGNPRDQAMASALLTADSQAMVKIEDMAVSLILEEW
GCQNLARRNLNRDSRQMNLGTVFSQGSENRNGSESTSKAEVKGDSTSHGEIAGRFQKEFG
EKREQQGRVIERQQKNPEEKTGKEKKAPGPPTAKEKKPTTGERGPREKGKGLGRSFSLSA
NFNNTPEEIPSGAKTHRCDECGKCFTRSSSLIRHKIIHTGEKPYECNECGKAFSLNSNLV
LHQRIHTGEKPHECNECGKAFSHSSNLILHQRIHSGEKPYECNECGKAFSQSSDLTKHQR
IHTGEKPYECSECGKAFNRNSYLILHRRIHTREKPYKCTKCGKAFTRSSTLTLHHRIHAR
ERASEYSPASLDTFGAFLKSCV
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgatgactgctgagtcaagggaagccacgggtctatccccacaggctgcacaggagaaa
gatggtatagtcattgtgaaggtagaagaagaagacgaggaagaccacatgtgggggcag
gacgctagccttcaggagacgccaccacccgacccagaggtgttccgccaacggttcagg
cgcttctgttaccagaacacttttgggcctcgagaagctctaaatcgactaaaggaactt
tgtcatcagtggcttcgaccagaagtcaacaccaaggaacagatcttggagctgttggta
ctggagcagttcctgtccatcctgcccaaagagctgcaagtgtggctgcaggagtaccgg
cctgacagtggagaagaggccgtgactcttctggaagacttggaacttgatctgtcagga
cagcaggtcccaggtcaagttcatgggcctgagatgcttgccaggggtgtggtgcctctg
gatccagttcaggagtcctcaagcttcgaccatcatgaagctgcccagtctcatttcaag
cattcgtctagaaagcctcgtctcttatcaccccgagctctccctgccacccacgttcct
gcccctcagcatgaggggaatcccagagaccaggcgatggcatctgcactattgaccgca
gattcccaggcaatggtgaagatcgaggacatggccgtgtccctcatcctggaggaatgg
ggatgtcagaacctggctcggaggaatctcaatagggacagcaggcagatgaatttggga
actgtgttttcccagggttctgagaacaggaatggaagtgagtcaacctcaaaagctgaa
gtcaaaggagattccacctcacacggggagatagcaggaagattccagaaagagtttgga
gagaagcgggaacagcagggcagagtaattgaaaggcaacagaaaaatcctgaagagaaa
actggcaaagagaagaaagcccctgggccacctacagccaaggaaaagaagcccaccaca
ggagagaggggcccaagggagaagggtaaaggtttgggaagaagcttcagcctgagtgca
aactttaataatactcccgaggagattccatcaggagcaaagactcatagatgtgatgag
tgtgggaaatgtttcacaagaagctcaagccttatccgccataaaatcatccacactgga
gagaaaccctacgaatgtaatgagtgtgggaaagccttcagtctcaattcaaaccttgtc
ctacatcagcgaatccacacaggagagaaaccgcatgaatgtaacgagtgtggcaaagcc
ttcagtcatagctcgaatcttatcctgcaccagcgcatccactctggagagaagccctac
gaatgtaatgagtgtggcaaagccttcagccagagctcagacctcacgaagcaccagaga
atccatacgggggagaagccctatgaatgtagtgaatgtggaaaagctttcaaccgaaac
tcataccttattttgcaccggagaattcatacccgagaaaagccctacaagtgcactaag
tgtggcaaggccttcacccgaagctcaaccctcacactgcaccatagaatccatgccaga
gaaagagcatcagaatacagcccagcctctctggatacctttggagcattcctgaaaagt
tgtgtgtaa

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