KEGG   Rattus norvegicus (rat): 498299
Entry
498299            CDS       T01003                                 
Symbol
Lefty1
Name
(RefSeq) left-right determination factor 1 precursor
  KO
K04668  left-right determination factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04350  TGF-beta signaling pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    498299 (Lefty1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    498299 (Lefty1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:rno04052]
    498299 (Lefty1)
Cytokines and neuropeptides [BR:rno04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   498299 (Lefty1)
SSDB
Motif
Pfam: TGFb_propeptide TGF_beta
Other DBs
NCBI-GeneID: 498299
NCBI-ProteinID: NP_001102550
RGD: 1561867
Ensembl: ENSRNOG00000003263
UniProt: A6JGI2 D4A670
Position
13:95188091..95191488
AA seq 368 aa
MRFLWLCWALWALFQVSPGEALTGEQVLGSLLQQLRLDRPPVLDKADVEGMVIPSHVRAQ
YVALLQHSHDSRSRGKRFSQNFREVAGRFLVSETSSHLLVFGMEQRLPPNSELVQAVLRL
FQEPVPRTALRRQKRLSPHSARARVTIEWLRFREDGSNRTALIDSRLVSIHESGWKVFDV
TEAVNFWQQLSRPRQPLLLQVSVQREHLGPGTWSAHKLVRFAAQGTPDGKGLGEPQLELH
TLDLKDYGAQGNCDPETPVTEGTRCCRQEMYLDLQGMKWAENWILEPPGFLTYECVGSCL
QPPESLTIRWPFLGPRQCVASEMTSLPLIVSIKEDGRTRPQVVSLPNMRVQRCSCASDGA
LIPRRLEP
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcggttcctatggctctgttgggcactctgggcactattccaggttagccctggagaa
gccctgactggagagcaggtcctgggcagccttctgcaacagctgcggcttgatcgaccg
ccagtcttggacaaggctgatgtggagggaatggtcatcccctcgcatgtgagggcccag
tatgtggccctgctccagcacagccatgacagccgctcccgaggcaagaggtttagccag
aactttcgagaggtggcaggcaggttcctggtgtcagagacctccagtcacctgctggtg
ttcggcatggagcagcggctgccgcctaacagtgagctggtgcaggctgtgctgcggctg
ttccaggagcctgtgcccagaacagctctccggaggcaaaagaggctgtccccacacagc
gcccgggctcgggtcaccattgaatggctgcgcttccgcgaggatggctccaaccgtacc
gcccttatcgattctaggctcgtgtccatccacgagagcggctggaaggtcttcgatgtg
accgaggccgtgaacttctggcagcagctgagccggccgaggcagccgctgctgctccag
gtgtcggtgcagagggagcatctgggaccggggacctggagcgcacacaagttggtccgg
ttcgcggcgcaggggacgccggacggcaaggggctgggcgagccacagctggagctgcac
acgctggacctcaaggactatggggctcaaggcaattgtgaccccgagacaccagtgact
gaaggcacccgatgctgtcgccaagagatgtacctggacctgcaggggatgaagtgggct
gagaactggatcctagaacccccaggattcctgacttacgaatgtgtgggcagctgcctg
cagccaccagagtccctgaccatcaggtggccatttctggggcctcggcagtgtgtggcc
tcagagatgacttccttgcccctgattgtcagcataaaggaggacggcaggaccaggcct
caagtggtcagcctgcccaacatgagggtgcagaggtgtagctgtgcctcggatggggcg
ctcatacccaggaggctggagccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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