KEGG   Rattus norvegicus (rat): 498335
Entry
498335            CDS       T01003                                 
Symbol
Cxcl13
Name
(RefSeq) C-X-C motif chemokine 13 isoform 2 precursor
  KO
K10032  C-X-C motif chemokine 13
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04060  Cytokine-cytokine receptor interaction
rno04061  Viral protein interaction with cytokine and cytokine receptor
rno04062  Chemokine signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    498335 (Cxcl13)
   04061 Viral protein interaction with cytokine and cytokine receptor
    498335 (Cxcl13)
 09150 Organismal Systems
  09151 Immune system
   04062 Chemokine signaling pathway
    498335 (Cxcl13)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:rno04052]
    498335 (Cxcl13)
Cytokines and neuropeptides [BR:rno04052]
 Cytokines
  Chemokines
   498335 (Cxcl13)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 498335
NCBI-ProteinID: NP_001017496
RGD: 1564256
Ensembl: ENSRNOG00000024899
UniProt: Q5I0J6
Position
14:complement(13912858..13917920)
AA seq 108 aa
MRLCTAALLLLLAICLPPGHGILETHYTNLKCRCSKVSSTFINLILVDWIQVIRPGNGCP
KTEIIFWTKAKKAICVNPTARWLPKVLKFVRRSITSTPQAPVSKKRAA
NT seq 327 nt   +upstreamnt  +downstreamnt
atgaggctctgcaccgcagccctgcttcttctactggccatctgcctccctccaggccac
ggtattctggagacccattacacaaacttgaaatgtaggtgttccaaggtgagctcgacc
tttatcaatctaattctcgtagattggattcaagttatacgccctgggaatggctgcccc
aaaactgaaatcattttctggaccaaggccaagaaagctatatgtgtgaatcctactgcc
agatggttaccaaaagtattaaaatttgtccgaagaagtattacttcaactccccaagct
ccagtgagtaagaaaagagctgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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