KEGG   Rattus norvegicus (rat): 498538
Entry
498538            CDS       T01003                                 
Symbol
Trim35
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35
  KO
K12012  tripartite motif-containing protein 35
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    498538 (Trim35)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    498538 (Trim35)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-B_box zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 zf-RING_5 zf-RING_6 zf-RING_10 Prok-RING_4 Baculo_IE-1 SpoIIE
Other DBs
NCBI-GeneID: 498538
NCBI-ProteinID: NP_001020313
RGD: 1564642
Ensembl: ENSRNOG00000009449
UniProt: Q5RKG6 A6K6M5 G3V769
Position
15:44669222..44685766
AA seq 515 aa
MKAAASVVTAAAPAMEPGPSVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRRCVS
GCWEVQTTPSCPVCKERAVPGELRTNHTLNNLVETLLREEAEGARWTGRRSPRPCRAHRA
PLTLFCVEDKELLCCACQADARHQEHRVQPIKDTAQDFRAKCKNMEHVLREKAKSFWALR
RTYEAIAKHNEVQTTWLEGRIRDEFDKLRDFLRVEEQATVDAMKEESRKKHLLAEEKMKQ
LAEQTEALAREIERLQMEMKEDDMTFLMKHKSRKRRLFCTVEPAPLQPGLLMDACKYLES
LQYRVWKKMLGSVESVPFSLDPNTAAGWLKVADDLTSVINHGYRVQVENPERFSSAPCLL
GSQVFSKGSHSWEVDVGGLPSWRVGVVRVQAHAQAQAQADVGGEGHSHSCYHDTRSGFWY
LCRTQGVDGDHCMTSDTATAPLVQAMPRRLRVELECEEGELSFYDSERHCHLYTFHAHFG
EVRPYFYLGASRGDGPPEPLRICHLRVSIKEELDI
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgaaggcggctgcatcggtggtgacggctgctgctcctgcgatggagccaggcccctct
gtgtcccccgggccttcgcgctccttcaaagaggagctgctgtgtgccgtgtgctacgac
ccgttccgcgacgcagtgactctgcgctgtggccacaacttctgccgccggtgcgtgagc
ggctgctgggaggtgcagacgacgccctcgtgcccggtgtgcaaggaacgagcggtgccc
ggggagctgcgcaccaaccacacgctcaacaacctggtggagaccttgctgcgcgaggag
gccgagggcgcgcgctggaccggtcgccggtccccgcgcccctgccgcgcgcaccgtgcc
ccgctcacgctcttctgcgtggaggacaaggagctgttgtgctgtgcctgtcaagccgac
gcccggcaccaggagcatcgtgtgcaacccatcaaggacactgcgcaggacttccgggcc
aagtgtaagaacatggagcacgtacttcgggagaaagccaagtccttctgggctctgagg
cgcacctatgaggccattgccaagcacaatgaggtgcagacaacttggctagaaggccga
atccgggatgagtttgacaagctccgagatttcctgagggtggaggaacaagccaccgtg
gatgccatgaaggaagagagcaggaagaagcacctgctggctgaggagaagatgaagcag
ctggcggagcagaccgaggcactggctcgagagattgagcgtctgcagatggagatgaag
gaagacgacatgaccttcctcatgaaacacaagagccgaaaacgccggctcttctgcacc
gtggagccagcacctctccagcctggcttgcttatggacgcatgcaagtatctggagtcc
ttgcagtaccgagtctggaagaagatgcttgggtctgttgaatcggtgcccttcagcttg
gatcccaacacagctgctggctggctcaaagtggctgatgacctcacgagcgtcatcaac
catggctaccgtgtgcaggtggagaatccagagcgcttctcctcggcaccctgcctgctg
ggctctcaagttttctccaagggctcccactcttgggaggtggatgtgggtggcctgccg
agctggcgagtgggcgtggtgcgggtgcaggcacatgcacaggcacaggctcaggctgat
gtcggtggtgagggccactcacacagctgttaccatgatacacgctcaggcttctggtac
ctgtgccgcactcagggtgtggacggagaccactgcatgacttccgacacagccacagcc
cctctggtccaggccatgccacgccgtctgcgtgtggagctggagtgtgaggagggtgag
ctgtccttctatgactctgagcgccactgccatctgtataccttccatgcccactttggg
gaggtgaggccctacttctacctaggggcctctcggggtgatggtcccccagaacctctg
cgcatctgccacctgcgtgtctccatcaaagaagagctggacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (13)   
   RefSeq(nuc) (5)   
   GenBank (4)   
   EMBL (4)   
Protein domain (15)   
   Pfam (15)   
All databases (46)   

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