KEGG   Rattus norvegicus (rat): 498545
Entry
498545            CDS       T01003                                 
Symbol
Tsc22d1
Name
(RefSeq) TSC22 domain family protein 1 isoform 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: TSC22 YabA SOGA ZapB DivIC DUF6262
Other DBs
NCBI-GeneID: 498545
NCBI-ProteinID: NP_001103382
RGD: 3850
Ensembl: ENSRNOG00000001030
UniProt: P62501
Position
15:58159612..58260244
AA seq 1050 aa
MHQPPESTAAAAAAADISARKMAHPAMFPRRGSGGGSASALSAAGTGVSGAAPSSEDFPP
PSSLLQPPPPAASSTQGPQPPPPQSLNLLSQAQLQGQPLAPGGTQMKKKSGFQITSVTPA
QISASISSNNSIAEDTESYDDLDESHTEDLSSSEILDVSLSRATDLGEPERSSSEETLNN
FQEAETPGAVSPNQPHLPQPHLPHLPQQNVVINGNAHPHHLHHHHHIHHGHHLHHGHHHS
SHAAVASTSVPGGPPPTSPVSRKLSTAGSSDGGVPVPPTSAVSSAGLPASVMTSIRAPST
PGSIGVNSVTGTNATNNVNIAAVGGFSPGVANSVHPNAVSISGGPGVTSGVNVNVLSGMG
NGTISSPVLNAAAGITVGVVSSQQQQPQQPPPTVNTSRFRVVKLDSTSEPFKKGRWTCTE
FYERENAVPGPEGVAINKVVETVKQTPTEASSSERESTSGSSVSSSVSTLSHYTESVGSG
EMGAPTVVVQQQQPLPPAPPGLQGVALQQLDFSSPGPQSISQSQMSQVQLQPQELSFQQK
PNLQPVPLQATMSAATGIQPSPVNVVGVTSAVGQQPSISSLAQPQLPYPQPAPPVQTPLP
GAPPQQLQYGQQQPMVPTQIAPGHGQPATQNPPSEYAQQQPIFQAAMSSGQSSSTGTGAS
VIPVAQPQGIQLPVQPTAVQAQPAGATGQPIGQAPTAVSTVPAGGQIASIGQQANIPTAV
QPPSTQVTPSVVQQGAPPSSQVVLPAPTGIIHQGVQTSAPSLPQQLVIAPQSTMVAVPPQ
TQGVEAVAHGVVSHQLPTGSPLPSASTISVTSQVSSAGPSGMSSVPTNLVPPQNIAQPPA
TQNGSLVQSVSQSPLIATNINLPLAQQIPLSSTQFSTQSLAQAIGSQMEDTRRPAEPSSG
GLPQTLSGDSGGVSAVSDGSSSSLAASASLFPLKVLPLTTPLVDGEDESSGASVVAIDNK
IEQAMDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPEQLAQFQAQL
QTGSPPATTQPQGTTQPPAQPASQGSGSTA
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgcaccagccgccagagtccaccgccgcggcggccgctgctgcagacattagtgctagg
aagatggcgcacccggcaatgttccctcgaaggggcagcggtggtggcagcgcctctgct
ctcagtgcagcaggtaccggcgtcagtggtgctgctccatcttctgaagattttcctcct
ccttcttcgctgctccagccgccgcctcctgctgcatcttccacacagggaccacagcct
ccgcctccacaaagcctgaacctcctttcacaggctcagctgcagggacagcctcttgcg
ccaggcggaactcagatgaaaaagaaaagtggcttccagataactagcgttactccggct
cagatctctgccagcatcagctcgaacaacagcatagcagaggacaccgagagctatgat
gacctggatgagtcgcacacggaagatctctcttcttccgagatccttgatgtctccctt
tccagggccactgacttaggtgagcctgaacgcagttcctccgaggagactctgaataac
ttccaggaagctgagacacctggggcagtctctcctaaccagccccaccttcctcagcct
catttgcctcaccttccacaacagaacgttgtgatcaatgggaacgctcatccacaccac
ctccatcaccaccatcacattcatcatgggcaccaccttcaccacggacaccaccattca
tcacatgctgctgtggccagtacatccgttcctggagggccaccacccacgagccccgtg
tccaggaaactctctacagctggaagttctgacggtggtgtgccagtcccacctacttct
gctgtatcatcggctggcttacctgcctcagtgatgacgagcatccgtgctccaagcact
ccaggcagcataggtgtaaattcagttaccggcacgaatgcaacgaataatgttaacatt
gctgctgtgggtggtttcagtcccggtgtggcgaacagcgtgcatcccaatgctgttagt
ataagtggtgggcctggagttaccagcggtgttaatgtgaatgtcttgagtggcatgggc
aacggtaccatttcttctcctgtccttaacgcagctgcaggtatcacggtgggagtggtt
tcaagtcagcagcagcagccgcagcagccgccgccaacagttaacacatcaaggttcaga
gttgtgaagttagactctacttctgaaccctttaaaaaaggcagatggacttgcactgaa
ttctatgagagagaaaatgctgtgccaggtccagaaggcgtggccataaataaagtggtg
gagaccgtgaagcaaacccccacggaagcgtcctcttcggagagggagagcactagtggg
agttccgtgagcagtagtgtcagcacactgagtcactacacagagagtgtgggaagcgga
gagatgggagcccctactgtggtggtgcagcagcagcagccgctaccaccagcaccacca
ggtcttcaaggcgtggccctccaacagctagatttcagtagccctggtccacagagtatt
tctcagtcacagatgtcacaggtacaactacagcctcaagaattgagctttcagcagaag
ccaaatcttcaacctgttcctctgcaagccactatgagcgcagcaactggtatccagcct
tcacctgtcaacgtggtgggtgtaacgtcagctgtaggtcaacagccttccatttccagt
ctggctcagccccagctgccgtatcctcagccagctcctcccgtgcaaactcctcttcca
ggggcaccaccccagcagttacaatatgggcaacagcaaccaatggttcctacgcagata
gccccaggccatggccagccagcaactcaaaaccctccttcagagtacgcacagcagcag
ccaatattccaagcggcaatgtcctctggacagtccagttccacaggcacaggagcgtca
gtgattcccgtggctcagccacaagggatccagctgccagtgcagcccacagcagtacaa
gcacaacctgcaggggcgactgggcagcccattggccaggctccaacagcagtgtctact
gtaccagctggtggtcagattgcaagtatcggtcagcaggcaaacatacccactgcagta
cagccaccctctacccaagttacaccttcagttgttcagcaaggtgctcctccatcttca
caagtagtcctacctgctccaactgggatcattcatcagggcgttcaaaccagtgctcca
agccttcctcagcaattggttattgcaccccagagtaccatggtagcggtgcctccccag
acacagggagtggaagcagtggctcatggagttgtttcccaccagttgcccacaggtagt
cctttgccctctgctagcaccatttctgttacaagtcaggttagttcagctggtccttct
ggaatgtcttctgtcccaacaaacttagttccaccacagaatatagcacaacccccagcc
acccaaaatggcagtttggttcaaagtgttagtcaatctccattgatagccactaacata
aatttgcctttggcacaacagataccgctaagttctactcagttctctacacaatcatta
gctcaggcaattggaagccaaatggaagacaccaggcgtccagcggagccctcctcaggc
ggcttacctcagactctcagtggtgacagtgggggagtgtcagcagtctcagatgggagt
agcagcagcctagcagcctctgcttctctcttcccgttgaaggtgctaccgctgacaaca
cccctggtggatggcgaggacgagagctctggtgcaagtgtggtagctatcgacaacaaa
atagagcaagctatggatctggtgaaaagccatttgatgtatgcagttagagaggaagtg
gaggttctgaaggagcagatcaaagaactaatagagaaaaactcccaactggagcaggag
aacaatctgttgaagacactggccagtccggagcagctcgcccagtttcaggcccagctg
cagactggctcccctccggctaccacgcagccacaggggaccacacagccccctgcacag
ccagcgtcccagggctcaggatcaaccgcatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (27)   
   RefSeq(nuc) (11)   
   GenBank (8)   
   EMBL (8)   
Protein domain (6)   
   Pfam (6)   
All databases (51)   

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