KEGG   Rattus norvegicus (rat): 498587
Entry
498587            CDS       T01003                                 
Symbol
Ldb3
Name
(RefSeq) LIM domain-binding protein 3 isoform 4
  KO
K19867  PDZ and LIM domain protein 5/6/7
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    498587 (Ldb3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    498587 (Ldb3)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   498587 (Ldb3)
SSDB
Motif
Pfam: DUF4749 PDZ PDZ_6 PDZ_2 DUF3854
Other DBs
NCBI-GeneID: 498587
NCBI-ProteinID: NP_001103960
RGD: 1564875
Ensembl: ENSRNOG00000059166
Vega: OTTRNOG00000001792
UniProt: Q5XIG1
Position
16:complement(9862161..9926338)
AA seq 283 aa
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPIQSPLPVIPHQKVVANSPANADYQE
RFNPSVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSD
FSGSLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYM
QDPDEEALRRSRERFETERNSPRFAKLRNWHHGLSAQILNVKS
NT seq 852 nt   +upstreamnt  +downstreamnt
atgtcttacagtgtgactctgactgggcctgggccctggggcttccgtctgcagggaggc
aaggacttcaatatgcccctcactatctcccggatcaccccaggcagcaaggcggcccag
tcccagctcagtcaaggagatcttgtggtggccattgatggagtcaacacagacaccatg
acccacctggaggcccagaacaagatcaagtcggccagctacaacctgagcctcactctg
cagaagtccaagcgtcctatccccatctccacgacagcaccccctatccagtccccattg
ccagtgatcccccaccaaaaggtggtagccaattctccagccaacgccgactaccaggaa
cgcttcaaccccagtgtcctgaaggactcagccctgtccacccacaagcccattgaggtg
aagggcttgggaggcaaagctaccatcatccacgctcagtacaacaccccaatcagcatg
tactctcaggacgccatcatggacgccatcgctgggcaggcccaggcccagggcagtgac
ttcagtgggagcctccctgtgaaagacctggcggtggacagcgcctctcccgtgtaccag
gctgtgatcaaaacccaaagcaagccagaagatgaggctgatgagtgggcccgccggtcc
tccaacctgcagtctcgttccttccgaatcttggcccagatgaccgggacagaatacatg
caagaccctgatgaggaagctctgcgaaggtcaagggaaaggtttgaaacggaacgtaac
agccctcgttttgccaagttgcgcaactggcaccatggcctttcagcccaaatccttaat
gttaaaagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (17)   
   UniProt (1)   
   RefSeq(pep) (16)   
DNA sequence (36)   
   RefSeq(nuc) (16)   
   GenBank (10)   
   EMBL (10)   
Protein domain (5)   
   Pfam (5)   
All databases (69)   

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