KEGG   Rattus norvegicus (rat): 498753
Entry
498753            CDS       T01003                                 
Symbol
Hist1h2af
Name
(RefSeq) histone H2a
  KO
K11251  histone H2A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno04217  Necroptosis
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    498753 (Hist1h2af)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    498753 (Hist1h2af)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    498753 (Hist1h2af)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    498753 (Hist1h2af)
  09165 Substance dependence
   05034 Alcoholism
    498753 (Hist1h2af)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    498753 (Hist1h2af)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    498753 (Hist1h2af)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    498753 (Hist1h2af)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   498753 (Hist1h2af)
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF Ribosomal_L27A
Other DBs
NCBI-GeneID: 498753
NCBI-ProteinID: NP_001019453
RGD: 1564767
Ensembl: ENSRNOG00000022146
UniProt: Q6I8Q6
Position
17:complement(41807261..41807653)
AA seq 130 aa
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLYKGNYSERVGASAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
TESHHKSKGK
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtctggacgcggcaagcagggcggcaaggctcgggctaaggccaagacccgctcctcc
cgggccggcctgcagttccccgtgggccgcgtgcaccgtctgctttacaagggcaactac
tcggagagggtgggcgccagcgccccggtgtacttggcggctgtgctggagtacctgacg
gccgagatcctggagctggcgggcaacgcggcgagggacaacaaaaagacacgcatcatc
ccgcgccacctacagctggccattcgcaacgatgaggagctcaacaagctgctgggccgt
gtgaccatcgcgcagggcggcgtcctgcccaacatccaggcagtgctgctgcccaaaaag
accgagagccaccacaagtccaaggggaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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