KEGG   Rattus norvegicus (rat): 498850
Entry
498850            CDS       T01003                                 
Symbol
Pcdhga12
Name
(RefSeq) protocadherin gamma-A12
  KO
K16495  protocadherin gamma subfamily A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    498850 (Pcdhga12)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   498850 (Pcdhga12)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail RET_CLD1 Bact_surface_Ig-like ChitinaseA_N
Other DBs
NCBI-GeneID: 498850
NCBI-ProteinID: NP_001032414
RGD: 1587258
Ensembl: ENSRNOG00000063070
UniProt: D4A498
Position
18:29843897..29919095
AA seq 932 aa
MIPMQRPEDCKGLVFLGVFFGMLWEAGSTQIRYSVPEELEKGSRVGNISKDLGLEPRELA
ERGVRIVSRGRAQLFALNPRSGSLVTAGKIDREELCMGSIKCQLNLEILMEDIGKIYGVE
IEVRDINDNAPYFRESELEIKMSENAAAGMRFPLPHAWDPDIGKNSLQSYQLSPNAHFSL
EVQKGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRSGTARILVTVLDANDNAP
AFARSEYRVNVRENVAVGTQLLLVNATDRDEGSNAEVIYSFRYVDDKAAKVFKLDSNLGT
ISTIGELNHEESGFYEMEVQATDNAGFSARAKVLVTVLDVNDNAPEVAITSLNSPVPENS
PRGTLIALLNVNDQDSGENGQVICSIQENLPFKLEKSYGNYYSLLTDAVLDREQVPSYNI
TVTATDRGSPPLTTETHLSLNVADANDNPPIFLQASYWAYIQENNPRGASIASVTAHDPD
SDKNAQVTYSLAEDTHQGVPLSSYVSINSDTGVLYALHSFDYEQFPDLQLQVIARDSGEP
PLSSNVSLSLFVLDQNDNTPEILYPTLPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVSTARALMDRDALKQNLVVSVQDHGQPPLSATVTL
TVAIADSIPDVLADLDNLESPTTSETSGLTLYLVVAVAAVSMVFLVFVLVLLALRLRRWH
SLRLLRAAGPGLADVAASRFVGVDGVQAFLQTYSHEVSLTAGSRKSHLIFPQPNYADTLI
SQESCEKTEPLLPSSDLVFSKDNHALNQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgatccccatgcaaaggccggaggactgcaaagggctggtattcctgggagtcttcttc
gggatgctgtgggaagccggatccacccagatacgctattccgttccggaggagctggag
aaaggatctagggtgggcaacatctccaaggatctggggctggagccccgcgagctggcg
gagcgaggggtccgcatcgtctccagaggtagggctcaacttttcgctctaaaccctcga
agcggcagcttggtcaccgcgggcaagatagaccgggaggagctgtgtatggggtccatc
aagtgtcagttaaatctagagattctaatggaagatatagggaaaatatacggagtagaa
atagaagtgagggacattaacgacaacgcaccctacttccgtgaaagtgaattagaaata
aaaatgagtgaaaacgccgccgctggaatgcgattccctcttccccacgcttgggatcca
gatatcgggaagaactctcttcagagctaccagctcagcccgaatgctcacttctcgctc
gaggtgcagaagggagctgatggtaacaagtacccagaattggtgctggagagctcgctg
gaccgggaggaaaaggccgctcacctcctagtcctcaccgcttcggacgcgggagacccg
gttcgctccggcacggcgcgcatccttgtgacggtcctagatgcaaatgacaacgcgcca
gcgtttgctcggtccgagtaccgcgtgaatgtgcgggagaacgtggccgtgggcactcag
ctgctgctggtcaacgccaccgaccgggacgaaggatccaatgcggaagtgatctattcc
ttccggtatgtagatgacaaggcagctaaagttttcaagctagacagtaatttgggaaca
atatcaacaataggggagctgaaccatgaagaatcggggttctacgagatggaagtgcaa
gcaacagataacgcgggattttctgcacgggccaaggtcctggtcacagttctggacgtg
aacgacaatgcccctgaagtagccatcacctccctcaacagccccgttccagaaaactct
ccccgagggacattaatagcccttttaaatgtaaatgaccaagattctggggaaaatgga
caggtaatctgttccatccaagagaatctgccctttaaattagaaaagtcttacggaaac
tactatagtttactcacagatgcagtcctagaccgtgaacaggttcctagttataatatc
acggtgaccgccactgacaggggaagtccgcccctgacaaccgaaactcacctctcgctg
aatgtagcggacgcgaacgataacccgcccattttccttcaggcctcatactgggcctat
atccaggagaataaccctagaggggcttctatcgcgtccgtgaccgcccacgaccctgac
agtgacaaaaatgcccaagtcacttactccctagctgaggacacacaccagggcgtgccc
ctttcctcttatgtctctatcaactcggatactggtgtcctgtacgcgctgcactccttt
gactatgagcagttcccagacctacagctgcaagtgatagcacgtgacagcggggagccg
ccgctcagcagcaacgtgtcgctgagcctgttcgtgctggatcagaatgacaacaccccc
gaaatcttgtaccccactctccctaccgatggttctactggagtggagctagcaccccgc
tcagcagagcctggctatctggtgacaaaggtggtggcagtggacagagactcaggacaa
aacgcctggctgtcctaccgtctgctaaaggccagcgagccaggactcttctcggtgggg
ctgcacaccggcgaggtgagcacggctcgggccctgatggacagagatgctctcaagcag
aaccttgtagtgtctgtgcaggaccacggccagcctcctctctccgccactgtcacgctc
actgtggcgatcgccgacagtatccccgacgtcctggcagatttggacaatctagaatct
cctaccacctctgaaacctcaggtctcacgctgtatctggtggtggccgtggcagcggtc
tccatggtcttcctggtctttgttctggtgctgctggcgctcaggctgcggcgctggcac
tcactgcgcctgctccgggctgcgggacccggattggctgacgttgcagcctctcgtttt
gtgggcgtagatggagtgcaagctttcttgcagacctattcgcacgaggtctcgctcact
gcgggctcccgaaagagtcacttgattttcccgcagcccaactatgcagacacgctaatc
agccaggagagctgcgagaaaaccgagcctcttttgccatcgagtgatttggtattttct
aaagacaatcatgcattaaatcagcaagccccgcccaacactgactggcgtttctctcaa
gcccagagacccggcacgagcggatcccaaaatggggatgaaaccggcacctggcccaac
aaccagttcgatacagagatgctgcaagccatgatcttggcctctgccagtgaagccgct
gatgggagctccactctgggagggggcactggcactatgggtttgagcgctcgatatgga
ccccagtttaccctgcagcacgtgcctgactaccgccagaacgtgtacatccctggcagc
aatgccacactgaccaacgcagctggcaaacgagatggcaaggctccggcaggcggcaat
ggcaacaagaagaagtcgggcaagaaagagaagaagtaa

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