KEGG   Rattus norvegicus (rat): 498918
Entry
498918            CDS       T01003                                 
Symbol
Irx5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
  KO
K24889  iroquois-class homeodomain protein IRX
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    498918 (Irx5)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    498918 (Irx5)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain
Other DBs
NCBI-GeneID: 498918
NCBI-ProteinID: NP_001025215
RGD: 1565518
Ensembl: ENSRNOG00000011180
UniProt: Q45V74
Position
19:complement(30812033..30816885)
AA seq 484 aa
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFVNARRRLKKENKMTWTP
RNRSEDEEEEENIDLEKNDEDEPQKPEDKGDLEGPEAGGTEQKAAAGCERLQGPLSPAGK
ETEGSLSDSDFKESPSEGRHDDLPRPPRAGEPSPAGPATARLAEDAGPHYPAGAPAPGPH
PSAGELPPGSGGSSVIHSPPPPPPPPPAVLAKPKLWSLAEIATSSDKVKDGGGGSEGSPC
PPCPGPIGGQTLGGSRASPAPAPARSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSFG
HLHGHPGPGPGPTAGPGSHFNGLNQTVLNRADVLAKDPKMLRSQSQLDLCKDSPYELKKG
MSDI
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcctacccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
cccgcatacagcaccagcgtcatttcggggccccgcacggatgagctcggccgctcttct
tcgggctccgcattctcgccctacgctggctccactgccttcacggctccctcgccgggc
tacaactcgcacctccagtacggtgccgatcccgcggctgcggccgccgccgccttctcg
tacgtgggctctccctatgaccacactcccggtatggcgggttccttgggatatcaccct
tacgccgcacctctgggctcctatccttatggggatcccgcgtaccggaagaacgccact
cgggacgccactgccactctcaaggcctggctcaatgagcaccgaaagaacccgtatccc
actaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtgtcc
acctggttcgtcaacgcgcgccggcgcctcaagaaagagaacaagatgacgtggacgcca
cggaaccgcagcgaggacgaggaggaggaggagaacattgatctggaaaagaacgacgag
gacgagccacagaagcccgaggacaagggcgacctcgagggccccgaagcaggaggaaca
gagcagaaggcggctgcgggctgcgaacggctgcaggggccgctcagccccgccggcaag
gaaactgaaggcagcctcagcgactcggattttaaagagtcgccctccgaaggccgccac
gatgacctgcccaggcccccgcgtgcaggcgagccctccccggctgggcccgcaactgcg
cgtctggcggaggatgcgggtcctcactaccctgcgggtgcgccggcgcccggcccgcac
ccatcagccggagagttgccccccggctcgggcggatcctcggtcatccactcaccaccg
ccacctccgccaccgcctccggccgtgctagccaagcccaaactgtggtctctggcagag
atagccacatcctcggacaaggtcaaggacgggggcggagggagcgagggctctccgtgc
ccaccgtgccccgggcccataggcgggcaaacccttggaggcagccgcgcttctcctgct
ccggcgcccgcacgctcaccctcggcgcagtgtccctttcctggcgggaccgtgctgtcc
cggcctctctactacacggcgcccttctatccgggctacacgaactatggctccttcgga
catcttcacggccacccagggccagggccaggccctacagcgggtcctggctctcatttc
aatggattaaaccagacggtgttgaatcgtgcggacgttttggctaaagacccgaaaatg
ttgcggagtcagtctcagctagacctgtgcaaagactccccctatgaattgaagaaaggt
atgtccgacatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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