KEGG   Rattus norvegicus (rat): 499339
Entry
499339            CDS       T01003                                 
Symbol
Pum3
Name
(RefSeq) pumilio homolog 3
  KO
K14844  pumilio homology domain family member 6
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    499339 (Pum3)
   03009 Ribosome biogenesis [BR:rno03009]
    499339 (Pum3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     499339 (Pum3)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    499339 (Pum3)
SSDB
Motif
Pfam: CPL PUF
Other DBs
NCBI-GeneID: 499339
NCBI-ProteinID: NP_001020207
RGD: 1564753
Ensembl: ENSRNOG00000012574
UniProt: Q562C7
Position
1:complement(234483482..234527718)
AA seq 647 aa
MEVKGKKKITGKSPQTSQGKNKFHKNSESSSAKAFPRKAAKEGGPKVTSKNFEKGATKPG
KKRVKQFKNKPQGGKGPKDKFQKANKFNKKRKFQPDGKSDESAAKKPKWDDFKKKKKELK
QNRQLSDKTNYDVVVRAKHIWESLRRKDCDKEKRVKLMSDLQKLIQGKIKTIAFAHDSTR
VIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMYGSKPQIAEIIRSFKGH
VRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYKSADHPTLEKVLEVQPGK
LELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYAPPKLRSELIEAIREAVVYLAHT
HDGARVAMHCLWHGTPKDRKVIVKTMKTYVEKIANGQYSHLVLLAAFDCIDDTKLVKQII
ISEVISSLPSIVNDKYGRKVLLYLLSPRAPAHLVPEIIQLLQKGDGNAHSKKDTAIRRRE
LLESISPALLSYLQGHTREVVLDKSVCVLVSDILGSATGDAQPAMDAIAGLAAEELYPGG
KDGELHIAEHPAGHLVLKWLIEQDKKIKENGKEGCFAKTLVECVGMKNLKSWASINRGAI
VLSSLLQSCDQDVVNKVKAGLKTLIPTLEKTKSTSKGIQTLLEKLTA
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggaagtcaaagggaagaaaaaaattacaggaaagagtccacagacatcacaaggaaag
aataaatttcataaaaacagtgagtctagttctgcaaaggcattcccaaggaaagctgct
aaggaaggcgggcctaaagtcacatctaagaactttgagaaaggtgccacaaaacctggc
aagaagcgtgtgaagcagttcaagaacaagccacaagggggcaaaggaccgaaggacaaa
ttccagaaggcaaataaattcaacaagaagcggaaattccagccagatgggaaaagtgat
gaatcagcagccaagaaacccaagtgggatgacttcaaaaagaagaagaaagagctgaag
cagaacagacagctcagtgataagaccaattacgacgtcgtggttcgagcaaagcacatt
tgggagagcttgagaagaaaagactgtgacaaagaaaaaagggtgaagctcatgagtgat
ttgcagaagctgattcaaggaaaaattaaaactattgcctttgcgcatgactcaactcga
gtgatccagtgcctcattcagtatgggagcgaggagcagaggaagtgggctttcgaagaa
ttgcaaggtgacttggttgaattaagtaaagccaaatattccaggaatatcgttaagaaa
tttctcatgtatggaagtaaaccacagattgcggagataatcagaagttttaaaggtcat
gtgaggaagatgctgcggcattcagaggcatcggccattgtggagtatgcgtacaacgac
aaagccattttggaacagaggaacatgctgacagaggagctctatgggaacacatttcag
ctttacaagtcagcagatcacccaacgctggaaaaggtgctagaggtgcagccagggaag
ctagaacttatcctggatgagatgaagcagattctgactcccatggcccaaaaggaagct
gtgattaagcactcactggttcataaagtattcttggacttttttacctatgcaccccca
aaacttcgatcagaactaattgaagccatccgggaagcagtggtgtacctggcccacaca
cacgatggcgccagagtggccatgcattgcttgtggcatggtacacccaaggacaggaaa
gtgattgtgaaaacaatgaagacgtatgtggagaagattgctaatggccagtactctcac
ctggttctcctggcagcgttcgattgtattgatgataccaagcttgtgaagcagataatc
atatcagaagtcatcagctccttgcccagcatcgttaatgacaaatatggaaggaaagtg
ctgctgtacctgctgagcccccgagcccccgcccacttggtgccagagatcatccagctg
ctgcagaagggcgacggcaatgcacacagtaagaaggacactgcaatccgccggcgtgag
ctcttggagtccatctctccagctttgctgagctacctgcaaggacacactcgggaggtg
gtgctggacaagtccgtgtgtgtgctggtgtctgacatcctgggatctgctactggggac
gctcagcctgctatggatgccatcgccggtttggcagcagaggaactgtatcctgggggc
aaggacggagagctccacattgctgagcatcctgcaggacatctggtcctcaaatggtta
atagagcaagataaaaagataaaagaaaatggaaaagaaggttgttttgcaaaaaccctt
gtagagtgcgttggtatgaagaacctcaagtcctgggccagcatcaaccgaggagccatc
gttctttccagccttcttcagagttgtgaccaggacgttgtaaacaaagtcaaagctgga
ctgaaaaccctgattcctaccttggaaaaaaccaaaagcaccagcaaaggcatccagact
ctgcttgagaagttgactgcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (15)   
   RefSeq(nuc) (9)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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