KEGG   Rattus norvegicus (rat): 499593
Entry
499593            CDS       T01003                                 
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04390  Hippo signaling pathway
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    499593 (Sox2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    499593 (Sox2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    499593 (Sox2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    499593 (Sox2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 499593
NCBI-ProteinID: NP_001102651
RGD: 1565646
Ensembl: ENSRNOG00000012199
UniProt: A6IHU9 D4A543
Position
2:119465131..119467542
AA seq 319 aa
MYNMMETELKPPGPQQASGGGGGGGNATAAATGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQEQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHY
QSGPVPGTAINGTLPLSHM
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtataacatgatggagacggagctgaagccgccgggccctcagcaagcttcggggggc
ggcggcggaggaggcaacgccacggcggcggcgaccggcggcaaccagaagaacagcccg
gaccgcgtcaagaggcccatgaatgccttcatggtgtggtcccgggggcagcggcgtaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgag
tggaaacttttgtcggagaccgagaagcggccgttcatcgacgaggccaagcggctgcgc
gctctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacg
ctcatgaagaaggataagtacacgcttcccggaggcttgctggcccccggcgggaacagc
atggcgagcggggttggggtgggcgccggcctgggtgcgggcgtgaaccagcgcatggac
agctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggagcagctg
ggctacccgcagcacccgggcctcaacgctcacggcgcggcacagatgcagccgatgcac
cgctacgacgtcagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccccggtatggcgctgggc
tccatgggctctgtggtcaagtccgaggccagttccagcccccccgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctc
cccggcgccgaggtgccggagcccgctgcgcccagtagactgcacatggcccagcactac
cagagcggcccggtgcccggcacggccattaacggcacactgcccctgtcgcacatgtga

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