KEGG   Rattus norvegicus (rat): 499702
Entry
499702            CDS       T01003                                 
Symbol
Synpo2
Name
(RefSeq) synaptopodin-2
  KO
K24066  synaptopodin-2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    499702 (Synpo2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    499702 (Synpo2)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   499702 (Synpo2)
SSDB
Motif
Pfam: PDZ Calsarcin PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 499702
NCBI-ProteinID: NP_001178892
RGD: 1564779
Ensembl: ENSRNOG00000014867
UniProt: D4A702
Position
2:complement(213901685..214055844)
AA seq 1262 aa
MGTGDFICISMTGGAPWGFRLQGGKEEKQPLQVAKIRSQSKASDSGLCVGDEVVSINGNP
CADLTYPEVIKLMESITDSLHLLIKRPTSGTSEALDSETENTNHQHLPHGGPMESTTLQI
QHAAKTQGKDFLLASVQTSAPRTEDQGNAWGYAECTTEDQVSQMPGSQEGHLVEEVILRK
KPEAGQPGHVVELQLSLSKERQRCTSDPIVTLLGNEKFKSPDPDWGTQHGRTVHINSIPA
PEKADTSLTSGTTVQTSSGRELTVIQGRDPGGTGLPQVEVILDCSDRLKAEECRLQAGRG
CVASPVEGGRSEAPPSLVSFAVSSEGTEQGEDQRSGKDQGRPHKHRARHARLRRSESLSE
KQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREEEEEDQ
EAGDKDEISDLAFLGTSESEVDEELLSDVDDNTQVVNFDWDSGLVDIEKRLNRGDKMEML
PDTTGKGALMFAKRRERMEQFTAQNEEEKTGGLAGGGSDALQTDGLRTMTSYQRKEESVR
MQSSVSESSFQMGRSLGSVPQQNGFSGVSETAGPQRMIPMNRTAKPFLGSVNQTAAPFSP
TQSVTSPIPDFPAPPPYSAVSPPPEAFSRGISSPVAGPAQPPPWPQPAPWSQPAFYDSSE
QIASRDERIAVPAKRTGILQEAKRRGTTKPMFTFKETKVSPNPELLSLLQNAEGKRGTGA
GGDSGPEEDYLSLGAEACNFMQSSAKQKTPPPVAPKPAVKTSSSSQPVAPVSPVWSPGVA
PAQGPAFSTTNPPNPPQVTAVSSIKIAQPTCPPARPASALNLAGPFKGPQAAVVSHNYTP
KPSAPTPLVNAAPAGAGGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHTVRAQS
PTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAAIKSQPPGAQASKTSKKKGKKPLNTL
DVMKHQPYQLNASLFTFQPPDSKDGLPQKSTVKVSSVAPAMKQALPPRQADIGSPTNAKA
SSVYSVPAYTSQPNFFAEATSPVSASPVPVSVPTSPKQETTSTSYFVAPRPKFSAKKSGV
TVQENWRSLSLPGRAAPPIMSAPPWLCQPAYSYSSKPTLEQEKANKRPTPWEAAAKSPLG
LVDEAFRPRNIEESIVANVVSAARRKVFAGSQEDWKERLSFVPQTQKTSMSFSERREYNV
PSPVNSHVSSHSLYSSQLPYVCYRKESRNDLKAMSMDTRSEYCLPLGGYDYNPHPRGWRH
QP
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgggcaccggagatttcatctgcatttccatgactggaggggcgccctgggggttcagg
ctgcaaggaggcaaggaggagaagcagcccttgcaagtggcaaagattcgaagtcagagc
aaggcatcggactccgggctgtgtgttggggatgaagtggtgtccatcaatggtaaccct
tgtgcagaccttacttaccctgaagtcatcaaactcatggaaagcataacggactccctc
catctgcttattaaaagacccaccagtggaacaagtgaggctttggattctgaaacagaa
aatacaaaccaccagcaccttccacacggggggcccatggaaagtaccaccctgcagatc
cagcacgctgccaagacccagggcaaagacttccttcttgcttcagtccagactagtgct
ccccgaactgaggaccaaggaaatgcctggggttatgcagagtgtacaacagaagaccaa
gtttcccagatgcctggctcccaagaaggacacttggtagaagaggtcatcttaaggaaa
aagccagaagcaggccagccaggccatgtggttgagttacagctgtccctctcaaaggaa
agacagcgatgcaccagtgaccctatagtgactctcctgggaaatgaaaaattcaagtct
ccagacccagactggggcacccaacacgggaggactgtccacataaattcaatccctgct
cctgagaaagcagacacttctctgacgtccggcaccacagtccagacctccagtggccgg
gagctgacagtgatccagggaagagacccaggaggcacagggctgccccaggtggaagtg
attctagattgctctgacaggctgaaggctgaagagtgcaggctgcaggcaggaaggggg
tgtgtggcttctcccgtggaaggagggcggtcagaagcacctccttctctggtctccttt
gcggtctcatcagaaggcaccgagcagggagaagatcaacgctcgggaaaggaccagggc
agaccacacaagcacagagcgaggcatgcccggctcaggaggagtgaaagtctgtctgaa
aagcaagtaaaagaagccaagtctaaatgcaaaagcatcgccctcctcctaacggatgct
cccaacccgaactccaagggggtgttgatgtttaagaagcggaggcggagagcccggaag
tacaccctagtcagttacggtactggagagcttgagcgagaggaggaagaggaggaccag
gaagcaggtgacaaggacgagataagtgaccttgcatttcttggaaccagcgagtcggaa
gtggatgaagagttactgtctgacgtggacgacaacacccaagttgtgaacttcgattgg
gattctggactggtggacattgaaaagaggctgaaccgaggcgacaagatggagatgttg
cccgacaccacaggcaagggagcgctcatgtttgccaagaggagagagaggatggaacag
ttcacagcccaaaatgaagaggaaaagaccggtgggctagcaggcggaggatcagatgcc
ctacagacggacggtctgagaaccatgacttcttatcaaagaaaagaagaatcggtgaga
atgcagagctctgtgagtgagagctccttccagatgggacgcagtcttggcagtgtgcca
caacagaatggcttcagtggagtgtctgagacagcagggccccagaggatgatccccatg
aacagaaccgccaagcccttcctgggatctgtgaaccagacagcggccccattctcccca
acacagagtgtgacaagtcccatccctgacttccctgcgccaccaccatactctgcagtc
tcacctccaccagaagccttctccagggggatatcaagcccagttgctggcccggcacag
ccccctccgtggccccagcctgctccatggtcgcaaccagccttctatgattcttctgag
caaatagcttcccgcgatgagaggatcgcagtgccggccaaaagaacaggaatactgcag
gaagccaaaagacgaggcacaacaaaacccatgtttactttcaaagaaaccaaagtgagc
cccaaccccgaactcctgtcccttcttcaaaatgcagaaggcaagcgaggcactggagct
ggaggggactccgggccagaagaagactacctcagtttaggcgcagaggcttgtaatttc
atgcagagttctgccaaacaaaagacccctcctcccgtcgctccaaagcctgcagtcaag
acctcctcttcctcccaaccagtagcccctgtttctccagtctggtctccaggagtggct
ccagcccagggtcctgccttctctacaacaaacccaccaaacccaccacaggtcactgct
gtgtcctccatcaaaatagcccagcctacctgccctccagcccggcccgcgagtgcactg
aacctggctggtcctttcaaaggtccccaagcagcagtagtcagtcataactatacaccc
aagccatcagcacccacaccattagtaaatgctgctcctgctggtgccgggggaccatcc
aatgagcttcctggaatgagtgggaaaggagcccaactcttcgctaaaaggcagtctagg
atggagaagtatgtggtagattctgacacggtgcaggcccacacagttcgggcccagtct
cctactccatccctgcccgccagttggaagtactcctccaatgtccgagcaccgcctccg
gtggcctacaatcctatccattccccgtcttacccactggctgctatcaagtctcagcca
ccgggagcccaggcctccaaaacgagcaagaaaaagggcaagaaacctcttaacactttg
gatgtcatgaagcaccaaccatatcagctcaacgcgtctttgtttacttttcaacccccc
gattcaaaggatggcctccctcaaaagtcaacagtcaaggtcagttcagtagcccctgcc
atgaagcaagcccttcctccccggcaggcggatattggctctcccacaaacgcgaaggct
tcatctgtgtattcagtcccggcctatacctctcagcccaacttctttgcggaggccacc
tcaccagtcagcgcatccccggtgcctgtgagtgttcccacctctccaaagcaagaaacg
acctccacatcctattttgtggctccgaggccgaagttctcagccaagaaaagtggtgtc
acagttcaggagaactggcgctccctttctctccccggaagagcagctccgcccatcatg
tctgcacctccctggctgtgccagcctgcctacagttactccagcaaaccaaccctcgag
caagagaaagctaacaagagacctacaccttgggaggcggcggccaagtcccctctcggt
ctagtggatgaggccttcagacccaggaacatcgaggaatccattgtggcgaatgtagtc
tctgcagctcggaggaaggtgtttgcagggtcccaagaggactggaaagagagactgtcc
tttgtccctcaaactcagaagaccagcatgagcttttctgaaaggcgagagtataatgtt
ccatccccagtcaacagccacgtgtctagccactccttatatagctcccagttgccatat
gtatgctacaggaaggagtccagaaatgatttgaaagcaatgtccatggacacgaggtct
gaatactgtcttccactaggtggttatgactataacccacacccaagggggtggagacac
caaccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (46)   

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