KEGG   Rattus norvegicus (rat): 499749
Entry
499749            CDS       T01003                                 
Symbol
Tprn
Name
(RefSeq) taperin
  KO
K24164  taperin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    499749 (Tprn)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     499749 (Tprn)
SSDB
Motif
Pfam: Phostensin Phostensin_N MAM33
Other DBs
NCBI-GeneID: 499749
NCBI-ProteinID: NP_001019480
RGD: 1562935
Ensembl: ENSRNOG00000010896
UniProt: Q5XHX2
Position
3:28474322..28481800
AA seq 753 aa
MAGLGRLDPGPRTVMPAWKREILERRRAKLAALSGGPGSGAAPDGPNERLVLAESLGPLS
QNPFMRLESERRRGARPAQQLLELYCRVPGVRTIRADNILIIESAPGFPPAVPPASSIRA
AEVVVYEEPQPGRVSRLLEKFDSPAAPRRRGSPERFRPALPQLPVAPASAATRAPTNRSL
APAPPVLPSQPAPPISPVPVAQRAGQRSACCEPAHPDGTAGPGARRSDFLQKTGSNSFTV
HPRGLPGSAVNRSLSNGPMTQESPAGPANGLSGSPPVPGKWKPKVESKEPSLHPPPSPGT
PSATPVGPPAFLAPSPASATPSQRQWVSSATSANDSFEIRPSSKPDMETIPIGDLQARAL
ANLRVNSRNSFVLIPKRKAPGNYPSAAGRQFEEPKGEVGWASQSQGLGSQLVSTVDGAPA
LEKSSLAAEMQWAVREGGCPRPAISDTDKSVRRQRPASPPPFLPATTEAEPAEGLGVPGL
TKNGQEPVRPGLPVTFIDEVDSEEAAFQEAKLPSSAVGVPSQYHLHPSTPGHTSELLNRG
SNTFTVVPKRKPGTLQEPHLSQTNGQFQQGAEEQDADSLSGPHTTLENALKKRYPTVNEI
EVIGGYLALQKSCLIKAGSSRKKMKISFNDKSLHTTFEYPSESSLAQEEAEEEEEEEEEE
EGEDGEEEEVGPDSEKSFTVLLPRATFVSSVGPESSSGLSSYTPKHSMAFSKWQEQTLVQ
APTEVELPPKEVMLTPASQNDLSDFRSEPALYF
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggccggcctggggcggctcgatccggggccgcgaaccgtgatgcccgcctggaaacgg
gagatacttgagcggaggcgagctaaactggccgctctgagcggaggcccgggatctgga
gcggcaccggatgggcctaacgagcggctggtgctggcggagagtctgggtccactaagc
cagaacccgttcatgcgacttgaatcggagaggcggcgcggggcgcggcccgctcagcag
ctgctggagctgtactgtcgtgtgcccggcgtgcggaccattcgagccgacaacatcctc
atcatcgagtcagcgccagggttcccgcccgctgtgccgcccgcttcgagcatccgcgct
gccgaggtagtggtgtacgaggagccacagcccggccgggtcagccgcctgctagaaaag
ttcgactcgcctgctgcgccccgccgccgcgggagcccagagcgcttccgccctgcgctc
ccgcagcttcccgtggcgcctgcatctgctgccacgcgcgctcctaccaatcggtcgttg
gctcctgccccaccggtgctccctagccagcccgcaccccctatttcgcctgtccccgtt
gcccagcgcgcgggtcagcgctctgcctgttgcgagcccgcgcaccccgacggcactgcc
ggccccggggcccggcgcagcgacttcctacaaaagaccggcagcaactccttcactgtc
cacccccgaggcctgcccggcagtgcggtcaatcgctcgctttctaatggacccatgact
caggaatcccctgccggccctgccaatgggttgtcgggctctccgcctgtaccgggcaag
tggaagccaaaggtggagtcaaaggaaccctccctccacccacccccaagccctgggacc
ccaagtgccactccagttgggccccctgccttcctggcgcccagcccagccagtgccact
cccagtcagcgccagtgggtctcctctgccaccagcgccaatgactccttcgaaataagg
ccatcctccaagccagacatggaaactatcccaattggggaccttcaggccagagccctg
gccaacctcagagtgaactcccgcaactccttcgtgttgatccccaagcgcaaagcccct
gggaactatccttcggcggcggggaggcaattcgaggagccaaagggggaggtgggctgg
gcctctcagagccaggggctcggatcccagctggtgtctacagtggatggtgcacctgcc
ctagagaagagttccttggctgctgagatgcagtgggcagttagggagggaggctgcccc
aggccagccatttctgacacagacaagtctgttaggaggcagaggccagcctcaccacct
ccatttctaccagccactactgaagctgagccggctgaaggcttgggggttcctggcttg
accaagaatggccaggagcctgtgaggccaggacttccagtcaccttcattgatgaagta
gactcagaggaggcggcctttcaagaagccaaactgccctcttcagcagttggtgtgcct
tcccagtaccacctgcacccttccacacctgggcacacctcagagctcctcaaccgaggt
agcaacactttcacagtagtgcccaagaggaagccagggacccttcaggagccacactta
agtcagactaatgggcagttccagcaaggggcagaggaacaggatgctgatagcctctcg
ggaccccacactaccctggagaatgccctaaagaaacgataccccactgtgaatgagatt
gaggtgatcggtggttacctggccctgcagaagtcctgcctcatcaaggctggctcctcc
agaaaaaagatgaagatctccttcaatgacaagagcctgcacacaacatttgagtaccct
tctgagagctctctggcccaggaggaggcagaggaggaagaagaggaggaggaggaggaa
gaaggagaggatggtgaagaggaggaagtggggcctgactcagagaaatccttcacagtt
ctcttgccccgggccacatttgtaagcagtgtgggacctgagagcagctcaggtctgtcc
agctacactccaaagcattccatggccttcagcaagtggcaggagcagacactggtgcag
gctccaactgaggtggagctcccaccaaaagaggtcatgctcacacctgccagtcagaat
gatctctcggacttccgcagcgagccagccctctatttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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