KEGG   Rattus norvegicus (rat): 499883
Entry
499883            CDS       T01003                                 
Symbol
Gabpb1
Name
(RefSeq) GA-binding protein subunit beta-1 isoform 1
  KO
K09454  GA-binding protein transcription factor, beta
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    499883 (Gabpb1)
   03029 Mitochondrial biogenesis [BR:rno03029]
    499883 (Gabpb1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Ankyrin only
    499883 (Gabpb1)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Ubiquitas transcription factors
    499883 (Gabpb1)
SSDB
Motif
Pfam: Ank_2 Ank Ank_4 Ank_3 Ank_5 CCDC84 LAMTOR5
Other DBs
NCBI-GeneID: 499883
NCBI-ProteinID: NP_001034125
RGD: 1560391
Ensembl: ENSRNOG00000010659
UniProt: Q4KM28
Position
3:complement(134333339..134380239)
AA seq 304 aa
MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVV
TAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGMGQPIIVTMPDGQQGERSAS
ETAG
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtccctggtagatttggggaagaagcttttggaagcggcacgggcaggccaagatgac
gaagtccgtattttgatggcaaatggagctccttttaccacagactggctgggaacttct
ccacttcatctggccgcacagtatgggcattactctaccacagaggtgcttctccgagcc
ggtgtaagtagagatgccaggaccaaagtggaccggacaccactgcacatggcagcttct
gagggccatgccagtatagtagaggttttgcttaagcatggtgctgacgtcaatgcaaag
gatatgttaaagatgacagctctgcattgggcgacagaacataatcatcaagaggtggtg
gagcttttaatcaaatatggtgctgatgtacacacgcagagtaaattttgtaaaactgca
tttgatatttcaatagacaatggaaatgaagatttagcagagatattacagattgctatg
cagaaccaaatcaacaccaacccggagagccctgacactgtgacaatacatgctgccacg
ccgcagttcatcattggacccggaggggtggtgaaccttacagatgaaacaggagtatct
gctgttcagtttggaaactcctctacgtcagtattagctacattagctgccttagcggaa
gcatctgccccattgtccaattcttcagagactccagtagtggccacagaggaagtggtt
accgcagaatctgtggatggtgcaattcagcaagtagttagctcagggggtcagcaagtc
atcacgatagtcacagatggaatccagctgggaaacctgcactccattccaaccagtggg
atgggtcagcccatcattgtgaccatgcccgatggacagcaaggagagagaagcgcttca
gaaacagctggatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (18)   
   UniProt (1)   
   RefSeq(pep) (17)   
DNA sequence (21)   
   RefSeq(nuc) (17)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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