KEGG   Rattus norvegicus (rat): 500006
Entry
500006            CDS       T01003                                 
Symbol
Pex1
Name
(RefSeq) peroxisomal ATPase PEX1
  KO
K13338  peroxin-1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    500006 (Pex1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    500006 (Pex1)
Membrane trafficking [BR:rno04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    500006 (Pex1)
SSDB
Motif
Pfam: AAA PEX-2N PEX-1N AAA_lid_3 AAA_16 AAA_14 nSTAND3 AAA_22 RuvB_N TIP49 ABC_tran AAA_5 Sigma54_activat AAA_18 RNA_helicase AAA_19 AAA_33 AAA_28 AAA_29 Sigma54_activ_2 DUF815 Bac_DnaA Mg_chelatase IstB_IS21 AAA_7 AAA_2 Zeta_toxin ATP-synt_ab T2SSE NACHT NTPase_1 CDC48_N APS_kinase ABC_ATPase FtsK_SpoIIIE AAA_23
Other DBs
NCBI-GeneID: 500006
NCBI-ProteinID: NP_001102690
RGD: 1559939
Ensembl: ENSRNOG00000025991
UniProt: A6K285 D3ZZB2
Position
4:complement(31474670..31513621)
AA seq 1283 aa
MWSSDRLAGAGSGGAVVTVAFTNARDCFLHLPRHLVAQLHLLQNQAIEVTGDHQPTYLSW
VEGRHFNDQSENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILE
LHAISLEEHLLDQIRIVFPKAIVPIWVDQQTYIFIQIVALMPTAPYGRLETNTKLLIQPK
TRQAKESTFPKEGDARGQAHNYGREQKGTVKELQTKQLHKNTEAVPVSNGRNPEVPGDSV
KPRWWAVLGSMFSFGPDNKQESAWGSLELGAFKNMQSQTVPLDSIFRVCQVQPPSVHNTP
ANSVFHKHCTVHVFPWDQEYFDVEPSFTVVYGKLVKLHSPKQQQDKSKQGVLLPEKEKQL
SQSPGHKRIGSDGSEEAAETCVLKVVWNGLEELKNATEFTKSLEPLHHGKVWIPADLRKR
LNIEMHAVVRITPLETTPVIPRALRLQPAENLPRDVSEEEVKAVFSSWLQESATTMFPLI
ISKQECIKLEIKDGLKEFSLSIVHSQEKEKEQGRTVFVLSPILLQKISVQVLLEPMIGEH
SEEIDILLPSLTLSSLGGVSSLSVSAMEHITHSLLGRPLSRQLMALVAGLRNGALLITGG
KGSGKSTLAKAICKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWRQPSVIL
LDDLDLIAGLPSTPEHEHSPEAVQSQRLAHALNNMIKEFVSMGSLVALIATSQLQHSLHP
SLVSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAKETEAFV
ARDFTVLVDRAIHSSLSRQQNPTREGLTLTTADFQKALRGFLPASLRNVNLHKPRDLGWD
KIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGM
NFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRV
VNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVL
SKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLEALQGRLLPGGLHDGGSSSDSDLS
LSSMVFLNHSSGSDDSAGDGECGLDQSLVSLEMSEILPDESKFNMYRLYFGSSYESELGN
GASCDLSSHCLSAPSSMTQDLPATPGKDPLFTQHPVFRTPSQEGSQDLTQEQRDQLRADI
SIIKGRYQSQSGEDESLNQPGPIKTSFAISQAHLMTALAHTRPSINEDEGKEFAELYENF
QNPKKRKNQSGTVFRTGQKVTLA
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgtggagcagtgatcgcttagccggtgcggggtctggtggggcggtcgtgacggtggcc
ttcacgaatgctcgggactgcttcctccatctgccacggcacctcgtggcccagcttcac
ctgctgcagaatcaagctatagaagtaaccggggatcaccagcctacctacttgagctgg
gtggaaggcaggcattttaatgatcaaagtgaaaatgtggcagaaattaatagacaagtt
ggccagaagcttggactctcgagcggggatcaggtgtttctcaggccgtgttcccatgtg
gtctcatgccagcaggttgaggtggagcctctctcggcagacgactgggagatactggag
ctgcacgccatttcccttgaagaacaccttctagatcagattcgaatagttttccctaaa
gccatcgttcccatctgggttgaccagcagacctacatatttatccaaattgtcgctctg
atgccaactgccccttatggaaggctagaaactaacaccaaactccttattcagccaaag
acccgccaagccaaagagagcacatttccaaaagaaggcgatgcacgtggacaagctcat
aattatgggcgagaacagaaaggaacggtaaaggaattgcaaaccaagcagcttcataag
aacacagaggctgtccctgtatctaatggaagaaacccggaagtcccaggtgactcagtg
aagccacgctggtgggctgtgctaggaagcatgttttcctttgggcctgacaacaaacaa
gagtcagcttggggctcattggaactcggtgctttcaaaaacatgcagtcacagactgtc
cctctagacagtattttcagagtgtgccaagttcagcctcctagtgtgcataacacccct
gctaactccgtgtttcacaaacactgcaccgtccatgtatttccatgggaccaagaatat
tttgatgtggagcccagctttactgtggtctatgggaaactagttaagctacattctcca
aaacaacagcaggacaaaagtaagcagggcgtcctgttacctgaaaaagagaagcaactg
tcccagtctccaggtcataagcggatcggctccgatggcagtgaggaagctgctgagacc
tgtgtgctgaaggtagtctggaatggactggaggagctgaagaatgccacggagttcacc
aaaagtctagagcctctccaccatgggaaagtctggattccagctgacctgagaaagaga
ctcaacatagaaatgcatgcagtagtcaggataactccactggaaaccacccctgtcatc
ccaagagccctgagattacaacctgcagagaacttacctagagacgtgagtgaagaagag
gtaaaagctgtgttctcatcgtggctacaggagtctgccaccaccatgtttcctttgata
atatcaaagcaagaatgtattaagctggaaattaaagatgggttgaaagagttctctctg
agcatagttcattctcaggaaaaagagaaggaacaaggaagaactgtttttgtgttgagt
cccattctgctgcagaagatctcagtacaagtccttctagagcccatgatcggagaacac
agtgaggaaattgacattcttcttccctctttaacactgagctctttgggcggtgtgagt
tccttaagtgtatctgccatggaacacatcactcacagtctcctgggacgccctttgtct
cggcagctgatggccctcgttgccggactgaggaatggggctcttttgatcactggagga
aagggaagcgggaaatcaacgttagctaaagccatctgtaaggaagcacatgacgctctg
gatgcccacgtggagatggtcgactgcaaagctttacgaggaaaaaggcttgaaagcata
caaaaagccctagaggtggctttctcagaggcagcctggaggcagccatccgtcattctg
ctggatgacctggacctcattgctggattaccgagcaccccagagcatgagcacagccct
gaagcagtgcagagccaacggcttgcacacgctttgaacaatatgatcaaagagtttgtt
tccatgggaagcttggtcgcgctcatcgccacgagccagctccagcactctctccatcct
tcccttgtctctgctcaaggagtccacacatttcagtgcatccagcacatccagcctcct
gatcaggaacagagatgtgaaattctgcatagtgttgtgaagaataaactgggctgtgat
ataagcaagtcccctgacttggacctgaagtgcatagctaaagagacggaggcgtttgtg
gctcgagactttacagttctcgtggaccgagccatacactcctctctctctcgccagcag
aaccccaccagggaaggattgactttaacaacagcagacttccaaaaggctctccgtgga
tttcttcctgcttctctgcgaaatgtcaacttgcataaacctagagacctgggctgggac
aagatcggtggattacatgaagttcggcagatactcatggatactatccagttaccagcc
aagtacccagaattatttgcaaacttacccatacgacagaggacgggaatactgctttat
ggccctcctgggacaggaaaaactttactcgctggggtggttgcaagagagagtgggatg
aactttattagtattcagggaccagagttactcagcaaatacattggagcaagtgagcaa
gctgttcgagatgtcttcatcagagcacaggctgcaaagccctgtattcttttctttgat
gagtttgaatccattgctcctcgaagaggtcatgacaacacaggggttacagaccgagta
gttaaccagttgctgacacagttagatggagtagaaggcttacagggagtttatgtgttg
gctgctactagtcgccctgatttgattgaccccgccttgttacggcccggccgactggat
aaatgtgtatactgccctcctccagatcaggtgtctcgtcttgagattttaactgtcctc
agcaagtctctacctctggcggatgacgtggaccttcagcacgtggcctctgtcactgag
tccttcactggagcggatctgaaagctctgctgtacaatgcacagctggaggccttgcag
ggacggctactgcccggcgggctccacgatggaggatccagctctgacagtgacctcagt
ctgtcttcaatggtctttcttaaccacagcagtggttccgacgactcagctggagatgga
gaatgtggcttagatcaatccctcgtttctctcgagatgtcggagatccttccagatgaa
tcaaaattcaatatgtaccggctgtactttggcagctcctatgaatcggaacttggaaac
ggagcctcttgtgacttgagctcacactgtctgtctgcaccgagctccatgactcaggac
ttacctgccactcctgggaaagacccattgtttacacagcatcctgtgttcaggacacct
tcccaagaaggctcccaagaccttacacaggagcagagagaccagctgagagcagacatc
agcatcatcaaaggcagataccagagccaaagtggagaggatgaatcccttaaccagcct
ggaccaatcaaaaccagttttgctattagtcaggcacatttaatgactgcgcttgcccac
acgagaccgtccattaatgaggatgaaggcaaggaatttgctgagctgtatgaaaacttt
caaaatccgaagaagagaaaaaatcaaagtggaacagtgtttcgaactggacagaaagta
acgttagcataa

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