KEGG   Rattus norvegicus (rat): 500116
Entry
500116            CDS       T01003                                 
Symbol
Tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
  KO
K12897  transformer-2 protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno04936  Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    500116 (Tra2a)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    500116 (Tra2a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    500116 (Tra2a)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    500116 (Tra2a)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     500116 (Tra2a)
Spliceosome [BR:rno03041]
 Common components
  Common spliceosomal components
   SR proteins
    500116 (Tra2a)
SSDB
Motif
Pfam: RRM_1 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 500116
NCBI-ProteinID: NP_001119768
RGD: 1562563
Ensembl: ENSRNOG00000009156
UniProt: B1WC25
Position
4:complement(79551699..79570621)
AA seq 282 aa
MSDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRS
RRHSHRRYTRSRSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRANPDPNTCLG
VFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANG
MELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGRRRDSYYDR
GYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq 849 nt   +upstreamnt  +downstreamnt
atgagtgatgtagaggagaacaacttcgagggcagagagtctcgctctcagtcaaaatct
ccaacgggaactcctgctcgtgtaaaatcagagagcaggtcaggatctcgtagtccatca
agggtttccaaacattctgaatcccattctcgatcaagatcaaaatccaggtcgaggtca
cggaggcattctcatagacgctacacgcgatccaggtcacactctcacagaagacggtcg
cgaagtaggtcctatacaccagagtacaggcggaggaggagccggagccactcccccatg
tcaaaccgcagaaggcacactggcagcagggcaaacccagatcctaacacttgcctggga
gtatttggcctcagtctgtatacaacagagagagatcttcgtgaagttttttctcgatat
ggacctctgagtggtgttaatgtggtttatgatcagcgaactgggaggtcacgcgggttt
gcttttgtgtattttgagaggatagatgactctaaggaggctatggaaagagcaaatggg
atggagctggatggtagaagaattcgtgtggattattctatcaccaagagagcacacaca
cctacaccaggcatttacatgggcagaccaactcacagtggtggtggaggtggcggagga
ggaggtggtggcggcggtggtggtggaggtggtagacggcgagattcttactacgataga
ggatatgatcgaggctatgacagatatgaagattatgattaccggtacagaagaaggtcg
ccttctccttactacagtcgctacaggtcacgatcaagatcccgttcctatagcccaaga
cgctattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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