KEGG   Rattus norvegicus (rat): 500363
Entry
500363            CDS       T01003                                 
Symbol
Tuba3b
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno04814  Motor proteins
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    500363 (Tuba3b)
  09143 Cell growth and death
   04210 Apoptosis
    500363 (Tuba3b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    500363 (Tuba3b)
   04540 Gap junction
    500363 (Tuba3b)
  09142 Cell motility
   04814 Motor proteins
    500363 (Tuba3b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    500363 (Tuba3b)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    500363 (Tuba3b)
   05012 Parkinson disease
    500363 (Tuba3b)
   05014 Amyotrophic lateral sclerosis
    500363 (Tuba3b)
   05016 Huntington disease
    500363 (Tuba3b)
   05020 Prion disease
    500363 (Tuba3b)
   05022 Pathways of neurodegeneration - multiple diseases
    500363 (Tuba3b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    500363 (Tuba3b)
   03036 Chromosome and associated proteins [BR:rno03036]
    500363 (Tuba3b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    500363 (Tuba3b)
   04147 Exosome [BR:rno04147]
    500363 (Tuba3b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     500363 (Tuba3b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     500363 (Tuba3b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    500363 (Tuba3b)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500363 (Tuba3b)
  Exosomal proteins of other body fluids (saliva and urine)
   500363 (Tuba3b)
  Exosomal proteins of colorectal cancer cells
   500363 (Tuba3b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 500363
NCBI-ProteinID: NP_001019507
RGD: 1565155
Ensembl: ENSRNOG00000032967
UniProt: Q68FR8 A6ILT9
Position
4:180319600..180325149
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtggggcaggcaggtgtccagattggcaatgcctgc
tgggagctgtactgccttgaacatggtattcagcccgatggtcaaatgccaagtgacaaa
accattggtggtggggacgactcattcaacacgttcttcagtgagactggcgccggcaag
catgtgcccagagcagtgtttgtggatctggagcccactgtggttgatgaagtgcgcacc
ggaacctaccggcagcttttccacccagagcagctgatcactgggaaggaagatgcagcc
aacaattatgccagaggtcattataccattggcaaggagattgttgacctggtcctggac
cggatccgaaaactggctgatctgtgcacggggctgcagggcttcctcatcttccacagc
tttggagggggcacagggtctgggttcgcatctctgctgatggagcggctttccgtggac
tacggcaagaagtccaagctggagtttgccatctacccagccccccaggtctccacggct
gtcgtggagccctacaactccatcctgaccacgcacacgacgctggagcactctgactgt
gctttcatggtggacaatgaagccatctacgacatctgtcggcgaaacctggacattgaa
cgtcccacttacaccaacctcaatcgtctgattgggcagattgtgtcgtccatcacagct
tctctgaggttcgacggggccctgaatgtggacttaacagaattccagaccaacctggtg
ccgtaccctcgcatccacttcccgctggccacctatgccccggtcatctcggccgagaag
gcctaccatgagcagctgtcagtggcagagatcaccaacgcttgctttgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttccaaaagatgtcaatgcggctattgctaccatcaagaccaagcgtacc
atccagtttgtggattggtgcccaactggctttaaggtgggtattaactaccagcctccc
accgtggtccctgggggcgacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accactgccatcgcagaggcctgggcccgcctggaccacaaatttgacctcatgtacgcc
aagcgggccttcgtgcattggtacgtgggagagggcatggaggaaggggagttctcagag
gcccgggaggacctggcagctctggagaaggattatgaagaggtgggcgtggattccgtg
gaagcagaggcagaagaaggggaggaatactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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