KEGG   Rattus norvegicus (rat): 500790
Entry
500790            CDS       T01003                                 
Symbol
Cactin
Name
(RefSeq) splicing factor Cactin
  KO
K25058  cactin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    500790 (Cactin)
Spliceosome [BR:rno03041]
 Complex C
  Other components
   Complex C specific factors
    500790 (Cactin)
SSDB
Motif
Pfam: Cactin_mid CactinC_cactus
Other DBs
NCBI-GeneID: 500790
NCBI-ProteinID: NP_001074916
RGD: 1563634
Ensembl: ENSRNOG00000039852
UniProt: A1L014
Position
7:complement(9042125..9047807)
AA seq 763 aa
MRGAGRQMGSHSRSRSRSAGRRSRKQRSRSRSCSRSRSRSRSRSRSRSHGGSGRRRREHE
RRRERKRRSRGRRSDSEGNRVQKSRRRSRSLRPPRWHSQDRSSHSDSGEEQAQGSRARKG
HRHSWSPGSSASSSDSPRRSRSPGVAALAASQQQSLQERLRLREERKQQEELLKAFETPE
EKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGIGHL
EEKELKERNKRIQEENRLELQKVKQLRLEREREKAMREQELELLQREKEAEHFKTWEEQE
DSFHLRQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDL
LEDIQVYMELEQGKNVDFWRDMTTITEDEIAKLRKLEASGKGPGERREGVNASVSSDVQS
VFKGKTYNQLQVIFQGIEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQK
LFKLKQEQGVESEPLFPILKSEPTATHSPEPEERPPSPGTSVDPVEPEETTAAGEAEGEA
DGEAVLMEEDLIQQSLADYDAGRYSPRLLTAHELPLDAHVLEPHEDLQRLQLSRQQLQAT
GDASESAEDIFFRRAREGMGQDEAQFSVEMPLGGRAYLWADKYRPRKPRFFNRVHTGFEW
NKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIRKRATPEYFLEACADNRDFAILRFHAGPP
YEDIAFKIVSREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcgcggcgcgggccgccaaatgggttcgcactctcgctcgcgctcacgatctgcgggt
cgtaggagtcggaagcagcggagtaggagtagaagctgcagcaggagccggagccgaagc
cggagccggagccggagccggagccatggggggagcggccgaaggcgacgggaacatgag
cggcggcgcgaacgcaaacggcgcagtcgagggcgcaggtcagattcggaaggaaaccgt
gtgcagaagtctaggaggcgaagccggagccttcggccaccccgatggcactcacaggac
cggtcctcacactctgactcgggtgaggagcaagcacagggctcccgagcccggaagggt
cacaggcattcgtggtccccagggtcatcagcatctagctctgactccccaagacgctcc
cggagtcctggagtagctgccctggccgcgagtcagcagcagagccttcaggaacggctg
cggcttcgtgaggagcgaaagcagcaagaagagctgctcaaggccttcgagacacccgag
gagaagcgtgcccggcgactggccaagaaagaagctaaggagcgcaagaagcgtgagaag
atgggctggggtgaggagtacatgggctacaccaacaccgacaacccctttggagacaac
aacctgctgggcacttttatctggaacaaagccttggagaaaaaaggcatcggtcacctg
gaggaaaaggagctgaaggaacgtaacaagaggatccaggaggagaaccggctagagctg
caaaaggtaaaacagctgcggctggagcgggaacgggagaaggccatgcgggagcaggaa
ctggaactgttgcaacgggagaaggaggcagagcactttaagacctgggaggagcaggag
gacagcttccacttgcggcaggccaagcttcgttccaagatccgaatccgagacgggcgg
gccaagcccattgacttgctggccaagtacatcagtgcagaggacgatgacctggcagtg
gagatgcatgaaccttacaccttcctcaacggcctcacggtggcagacatggaggacctg
ctagaggacatccaggtgtacatggagctggagcagggcaagaacgtggacttctggcga
gacatgacaaccatcacagaggatgagattgccaagctccgcaagctggaggcctcgggc
aagggcccaggtgagcgccgtgagggggtcaacgcctcggtcagctctgacgtgcagtcc
gtcttcaagggaaagacgtacaaccagctgcaggtcatcttccagggcatcgaaggcaag
atccgtgccggcggccccaacctcgacatgggctactgggagagcctgctgcagcagttg
cgcgcgcacatggccagggccaggctccgtgagcgccaccaagatgtccttagacagaag
ctgttcaaactgaagcaggagcagggtgtggagagtgagccgctgtttcccatcctcaag
tcagagcccacagccactcacagccctgaacctgaggaacggcctcccagccctgggact
tcagtggaccccgtggaacccgaggagaccacagcagcaggcgaggcagagggagaggca
gatggcgaggcagtgctgatggaggaggacctgatccagcagagcctggcagactatgac
gctggccgctacagcccacgactgctcaccgcgcacgagttgcctttggacgcgcatgtg
ctggagccgcatgaggacctgcagcgcctgcagctgtctcgccagcagcttcaggctaca
ggtgacgcgagcgagagtgctgaggacatcttcttccggcgtgcgagggagggcatgggg
caggatgaggcacagttcagcgtggagatgccactgggtggccgcgcctacctgtgggcc
gacaagtatcggccgcggaagccgcgattctttaaccgtgtgcacacaggctttgaatgg
aacaaatataaccagacacattatgactttgacaaccctccacccaagatcgtgcagggc
tacaaatttaacatcttctacccggacctcatccgcaaacgtgccacaccagagtacttc
ctggaggcctgcgctgacaaccgggactttgccatcctgcgtttccacgcaggcccgccc
tacgaggacatcgccttcaagatcgtcagtcgagaatgggagtactcgcaccgccatggc
ttccgctgccagtttgccaatggaatcttccagctctggttccacttcaagcgctaccgc
taccgccggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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