KEGG   Rattus norvegicus (rat): 500987
Entry
500987            CDS       T01003                                 
Symbol
H2ax
Name
(RefSeq) H2A.X variant histone
  KO
K11251  histone H2A
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
rno04217  Necroptosis
rno04613  Neutrophil extracellular trap formation
rno05034  Alcoholism
rno05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    500987 (H2ax)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    500987 (H2ax)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    500987 (H2ax)
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    500987 (H2ax)
  09165 Substance dependence
   05034 Alcoholism
    500987 (H2ax)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    500987 (H2ax)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    500987 (H2ax)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    500987 (H2ax)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   500987 (H2ax)
SSDB
Motif
Pfam: Histone_H2A_C Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 500987
NCBI-ProteinID: NP_001102761
RGD: 1566119
Ensembl: ENSRNOG00000010386
UniProt: D3ZXP3 A6J3X1
Position
8:53568718..53570072
AA seq 143 aa
MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK
TSATVGPKAPAGGKKASQASQEY
NT seq 432 nt   +upstreamnt  +downstreamnt
atgtcgggtcgcggcaagaccggcggcaaggcccgcgccaaagccaagtcgcgctcttcg
cgcgccggccttcagttcccggtaggccgcgtgcaccgactgctgcggaaaggccattac
gccgagcgcgtgggcgcaggcgcgcccgtgtacctggcggcggtgctcgagtacctcact
gccgagatcctggagctggcgggcaacgcggctcgggacaacaagaagacgcgcattatc
ccgcgccacctgcagctggctatccgcaacgacgaggagctcaacaagctgctgggcggc
gtgactatcgcgcagggcggcgtcctgcccaacatccaggccgtgctgctgcccaagaag
accagcgccaccgtggggcccaaggcgccggcgggcggcaagaaggcctcccaggcctct
caggagtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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