KEGG   Rattus norvegicus (rat): 501088
Entry
501088            CDS       T01003                                 
Symbol
Tbc1d5
Name
(RefSeq) TBC1 domain family member 5
  KO
K18469  TBC1 domain family member 5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    501088 (Tbc1d5)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    501088 (Tbc1d5)
SSDB
Motif
Pfam: RabGAP-TBC Med3 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 501088
NCBI-ProteinID: NP_001128234
RGD: 1561626
Ensembl: ENSRNOG00000010637
UniProt: F1M9Q1
Position
9:complement(3740032..4256971)
AA seq 805 aa
MYKSVSETRHPLQSEEQEVGIDPLFSYSNKPRGDSCQNGRGANSNLDCDGTFSSYMREWD
DLFVNNNYLAAVRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIKELRSWYSNIK
EIHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSMIEQDVRRTFPEMQFFQQE
NVRKILTDVLFCYARENEQLLYKQGMHELLAPIIFTLHCDHQAFLHASESAQPSEEMKTL
LNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMPPIPFARPQDLGPTVAIVTK
VNQIQDHLLKKHDTELYMHLNRLEIPPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGL
HLSLVDYVFTAMLLYIRDALISSNYQTCLGLLMHYPLIGDIHSLILKALFLRDPKRNPRP
VTYQFHPNLDYYKARGADLMNKSRTNARGAPLNIHKVSNSLINFGRKLIAPASAPGSMGG
PVPGSNSSSSFSAAVPFRTSAEAPRHHSQQQRQQQQQQQQQQQQQQQQQQQRLMKSESMP
VQLNKGQSPKTISSSPSMESLPGGREPPGSPPSSATKRDSFFSHIARSRSHSKAMGRKES
EEELEAQISFLQGQLNDLDAMCKYCAKVMDMHLVNIQDVVLQENLEKEDQILVSLAGLKQ
IKDILKGSLRFNQSQLEAEENEQITIADDHYCSSGQDQGTQGPRAAKQASSEMPGCTGGA
TSDDFILVSKEDEGRRAKEAFSGQAQPLLTLRNTSGKSRVPTCSPLVFSDPLMGPASASS
SNPSSSPDDDSSKDSGFTIVSPLDI
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtataagtctgtgtctgaaactagacatcctctgcagtcagaagaacaagaagtaggc
attgaccccttgttcagttattcaaacaagccaagaggagattcctgtcaaaatggaaga
ggagcaaattccaacttagactgcgacgggactttcagttcatatatgagagagtgggac
gacctctttgtaaataacaactacttggcagcagtgaggcagaaggggattaatgggcag
ctgagaagcagcaggttccgcagcatttgttggaagctctttctttgtgttcttcctcaa
gataaaagtcaatggatcagtagaattaaagaactaagatcctggtatagcaatattaaa
gaaatacatatcactaatccaaggaaagttgttggccaacaggatctgatgataaacaat
cccctctcacaagatgaaggaagtctttggaataagttctttcaagataaagagctgcgg
tccatgattgagcaagatgtcagaagaacgtttcctgaaatgcagtttttccaacaagaa
aatgtgagaaaaattcttacagatgttctgttctgctatgctagagaaaacgagcagttg
ctttataaacagggcatgcatgagctgctagcgcccatcatcttcacccttcactgtgac
caccaagcttttctacacgccagtgagtctgcacagcccagtgaggaaatgaaaactctc
ttgaaccctgagtatctggagcatgatgcctatgcaatgttctcacagcttatggaaact
gctgaaccttggttttccacttttgagcatgatggtcaaaagggaaaagaaactctgatg
ccccccattccctttgctcgaccacaggatttaggaccaacagttgccattgttacaaaa
gtcaaccagatccaggatcatctactgaagaagcatgatactgagctctacatgcacttg
aacagactagaaattccaccacaaatatatgggttacggtgggtgcggctgctgttcggc
agagagttccctctacaggacctgctggtggtctgggatgccctgtttgcggacggcctc
cacctgagtctagttgactatgtcttcacggccatgctgctctacatccgagacgctctg
atttctagtaactatcagacctgtctcggccttttgatgcattatccactcatcggggac
atacactcactgatactgaaggccctgttccttagagacccaaagagaaaccccaggcca
gtgacttaccagttccaccccaatttagactactacaaagcacggggagctgaccttatg
aacaaaagccggaccaatgccagaggtgctcctctgaatatacacaaggtctccaacagc
ttgattaactttggaagaaagttgattgccccggcctcagctccaggcagtatgggtggc
cctgtgcctgggagcaacagcagcagctctttctctgctgccgtccccttcaggacctcc
gcagaagccccgaggcatcattctcagcagcagcggcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcggttgatgaagtctgaaagcatgccg
gtacagttgaacaaagggcaaagtccgaaaaccatcagttcatctccgagtatggagagt
ttgcccgggggaagagaaccccctggctccccgccttcatctgctaccaaaagggattcc
tttttcagccacatcgcccgctcccgctcacacagcaaagccatgggcagaaaagaatct
gaagaagaattagaagcccagatttccttcctacaaggtcagctgaatgacctggatgcc
atgtgcaagtattgcgcaaaggtcatggacatgcatcttgtaaatattcaagatgtggta
ttacaagagaatttggaaaaagaagatcaaattctggtgtccttggcaggattaaaacag
atcaaagacattctgaaaggttccctgcgcttcaaccagagccagctggaggctgaagag
aacgaacagattaccatcgctgatgaccactactgctccagtggccaggaccagggcacc
caaggccctagggccgccaagcaggcctcttcagagatgccagggtgcacaggtggagcg
acctcagacgacttcattctggtttctaaagaagatgaggggcgccgtgcgaaggaggcc
ttctcaggccaggcccagcccctgctcaccctcagaaacacgtctgggaaaagtcgagtc
ccaacctgctccccactggtgttctcagacccactgatgggcccagcctcagcctcctcc
agcaaccctagctccagcccagatgatgacagcagcaaggactctggcttcaccatcgtg
agccccttggacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (18)   
   UniProt (1)   
   RefSeq(pep) (17)   
DNA sequence (23)   
   RefSeq(nuc) (19)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (53)   

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