KEGG   Rattus norvegicus (rat): 501099
Entry
501099            CDS       T01003                                 
Symbol
Srf
Name
(RefSeq) serum response factor
  KO
K04378  serum response factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04022  cGMP-PKG signaling pathway
rno05166  Human T-cell leukemia virus 1 infection
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    501099 (Srf)
   04022 cGMP-PKG signaling pathway
    501099 (Srf)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    501099 (Srf)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    501099 (Srf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    501099 (Srf)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    501099 (Srf)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 501099
NCBI-ProteinID: NP_001102772
RGD: 1559787
Ensembl: ENSRNOG00000018232
UniProt: A6JIQ4 D3ZHH8
Position
9:21924050..21933338
AA seq 504 aa
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGGSGGTRGANGGRVPGNGAGLGPGRLEREA
AAAAAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMELGVVVGGPEAAAAAAGGY
GPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVL
LLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEEP
DLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPITNYLA
PVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPVQAIHVHQ
APQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLA
DGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQ
AGSSSNLTELQVVNLDATHSTKSE
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
agcctgaacaggaccccgacggggcggccgggcggcagcggtgggactcgcggggcgaac
gggggccgggtccccgggaacggcgcggggctcggcccgggtcgtctggagcgggaggct
gcagcagcagcagcgcccaccgccggggccctctacagcggcagcgagggcgactctgag
tccggcgaggaggaggagctgggcgccgagcggcgcggcctcaagcggagtctgagcgag
atggagctcggtgtggtggtcggtgggcctgaggcggcggcggcggccgccggaggctac
ggaccggtgagcggcgcggtgagcggggccaagccggggaagaagacccggggccgcgtg
aagatcaagatggagttcatcgacaacaagctgcggcgttacacgaccttcagcaagagg
aagacgggcatcatgaagaaggcttatgagctgtccacgctgacagggacacaggtgctg
ttgctggtggccagtgagacaggccatgtgtatacctttgccacccgcaaactgcagccc
atgatcaccagtgagaccggcaaggcgctgattcagacctgcctcaactcgccagactct
ccaccccgctcagaccccagcacagaccagagaatgagtgccactggctttgaagagcca
gatctcacctaccaggtgtcggaatctgacagcagtggggaaaccaaggacacactgaag
ccagcattcacagtcaccaacctgccgggtaccacctccacaatccaaacagcacccagc
acctctaccaccatgcaagtcagcagcggcccctccttccccatcaccaactacctggca
ccagtgtctgctagtgtcagccccagtgctgtcagcagtgccaacgggactgtgctcaag
agtacaggcagcggccctgtctcctctgggggccttatgcagctgcctaccagcttcact
ctcatgcctggtggggcagtggcccagcaggtccctgtgcaggccattcatgtgcaccag
gccccacagcaagcgtctccctctcgtgacagcagcacagacctcacgcagacctcctcc
agcgggacagtgacgttgcccgccaccatcatgacgtcgtctgtacccacaactgtgggt
ggccacatgatgtaccctagtccccatgcagtgatgtatgcccccacctcgggcctggct
gatggcagcctcaccgtgctcaatgccttctctcaggcaccatccaccatgcaggtgtcc
cacagccaggtccaggagccaggtggtgtccctcaggtgttcctcacagcaccgtctggg
accgtgcagatccctgtctctgccgttcagcttcaccagatggctgtgataggacagcaa
gctgggagcagcagcaacctcaccgagctacaggtggtgaacttggacgccacccacagc
accaagagtgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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