KEGG   Rattus norvegicus (rat): 501621
Entry
501621            CDS       T01003                                 
Symbol
Nxf7
Name
(RefSeq) nuclear RNA export factor 7
  KO
K14284  nuclear RNA export factor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
rno03013  Nucleocytoplasmic transport
rno03015  mRNA surveillance pathway
rno05014  Amyotrophic lateral sclerosis
rno05164  Influenza A
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    501621 (Nxf7)
   03015 mRNA surveillance pathway
    501621 (Nxf7)
   03008 Ribosome biogenesis in eukaryotes
    501621 (Nxf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    501621 (Nxf7)
   05168 Herpes simplex virus 1 infection
    501621 (Nxf7)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    501621 (Nxf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    501621 (Nxf7)
   03009 Ribosome biogenesis [BR:rno03009]
    501621 (Nxf7)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     501621 (Nxf7)
   mRNA cycle factors
    Stress granule specific factors
     501621 (Nxf7)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    501621 (Nxf7)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2 LRR_8 LRR_4
Other DBs
NCBI-GeneID: 501621
NCBI-ProteinID: NP_001032293
RGD: 1566170
Ensembl: ENSRNOG00000023256
UniProt: Q498M8
Position
X:complement(102828592..102845799)
AA seq 614 aa
MCSNERRQGPFRYTGRKKDRVSSLGYTGKKTNHYEDTGHTILPSKAWGNGGNMETRAVLW
NPSVRHTPYSGRRKSREEEHVEDQIHITVWRDEKAQKREVEQFTEDGTLESWFKVTIPCG
RKCDKTQLMNSVHSLCSVPFTPVDFHCDKYRIQFFVQDSSIAYALKDVSYKISSEDFEKI
PIFVNPSVAPYSVQNRFTREQMEQLKLAMKKRYDISQHALCLKKLRFDPDLMNHNIDMIL
NRRSCMTATLQIIQEDFPKLLSLNLSSNKLFQLDSLFDVVKKAPKLKILNLSKNMLRTAW
ELEKIRGLKLEQLWLEGNPLCSTFPDHSSYVSAILEYFPQLSCLDGRKLPLSTGMDIEEP
QLMKPRKAIFKGSEAIKNQVQQFLQDYYLIYDSEERQGLLSIYHEQACFSLTIPFNPSGP
DLSSMCGYFKDERDVKNPKEFHIQRQLLKYTKEDIVGYLRTLPKTLHVFNSFQVDICFQM
EKTLCFSVSGLFKEVEGSSQECIRAFMRIFIAVFESSSNLCIVNDQLFVRNPSPDEIQGA
FAISSPTSCSSFKLVLSQEQQRMVQAFSTQSGMKLEWSQKCLDDNKWDYTRAAEVFTMLQ
TKSKIPKEFFKQMT
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgtgctctaatgaaaggaggcagggaccctttagatacacaggaagaaagaaagacagg
gtttcttctctgggctatactggcaagaagaccaatcattatgaggatactgggcacaca
attctgccttcaaaagcctggggtaatggtggaaatatggagacgagagccgttctctgg
aacccatccgtaagacacacaccttattctggacgacgtaagagcagagaggaagagcat
gtggaggaccaaatccatatcacagtgtggagagatgaaaaagctcaaaagagagaagtg
gagcagttcacagaagacggaacactggagagctggttcaaggtcacgattccatgtggg
agaaagtgtgacaagacacagctaatgaattcagtccacagcctttgcagcgtgcccttc
acaccagtggattttcattgtgacaaataccggatccagttctttgtccaggattctagc
attgcatatgcattgaaggatgtcagctacaagataagtagtgaggactttgagaagata
cctatttttgtcaatccctcagttgcaccctactctgtgcagaataggttcacaagagaa
caaatggagcaactgaagctggccatgaagaaaagatatgatatttcccagcatgctctg
tgcctcaaaaagctccgctttgacccagacttgatgaatcacaacatagacatgattctg
aacagaagaagctgcatgactgccacccttcagatcatccaagaggattttcctaagctg
ttatccttgaacttgagcagcaacaaactgttccagttagatagcctgtttgacgttgta
aagaaggcacccaagctcaagatcctgaacctctccaaaaacatgctaagaacagcatgg
gaactggagaagataagagggctgaagctggaacagctgtggctagaagggaatcccttg
tgcagcaccttcccagaccattcttcttacgtaagtgcaatcctggagtattttccgcag
ttgtcatgcctggatggcaggaagttaccactttcaactggaatggatattgaagaaccc
cagttaatgaagccccgcaaggccatctttaaaggttcggaggccataaagaatcaagtg
cagcaattcctgcaagactattacttgatctatgactctgaagagcgacaaggtctcctg
agcatttaccatgagcaggcctgtttctccctgaccattcccttcaaccccagtggtcca
gatctgagtagcatgtgtgggtacttcaaggatgaaagggatgtgaagaatcccaaggag
ttccacattcagaggcagctgctgaagtacacaaaagaagatattgtgggctatctgagg
acattacccaaaaccctgcatgtcttcaactctttccaggtggacatctgtttccagatg
gaaaaaacgctctgcttctctgttagtgggttgttcaaggaagtggagggcagctctcag
gaatgcatccgtgccttcatgaggatcttcattgctgtctttgaaagtagttcaaacttg
tgcattgtgaatgaccaactttttgtgaggaatccaagccctgatgagatccagggtgcc
tttgctatatcctcgcccacatcatgctccagcttcaagctcgtcctttctcaagagcag
caaagaatggtgcaggctttctccacccagtcggggatgaaacttgaatggtctcagaaa
tgccttgatgacaacaagtgggactatactagagctgctgaagtcttcactatgctccag
accaagagtaagatcccgaaggaattcttcaaacaaatgacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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