KEGG   Rattus norvegicus (rat): 502020
Entry
502020            CDS       T01003                                 
Symbol
Lrch1
Name
(RefSeq) leucine-rich repeat and calponin homology domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: LRR_8 LRR_1 LRR_4 CH CAMSAP_CH
Other DBs
NCBI-GeneID: 502020
NCBI-ProteinID: NP_001128199
RGD: 1595678
Ensembl: ENSRNOG00000009412
UniProt: B2GV98
Position
15:complement(56469403..56659201)
AA seq 677 aa
MATPGSEPQAFAPALSVTALHPHIHQHHQHHGSTGSAGFNLPLNRGLERALEEAANSGGL
NLSARKLKEFPRTAAPGHDLSDTVQADLSKNRLVEVPMELCHFVSLEILNLYHNCIRVIP
EAIVNLQMLTHLNLSRNQLSALPACLCGLPLKVLIASNNKLGSLPEEIGQLKQLMELDVS
CNEITALPQQIGQLKSLRELNVRRNYLKVLPPELVDLPLVKFDFSCNKVLVIPVCFREMK
QLQVLLLENNPLQSPPAQICTKGKVHIFKYLSIQACQIKTADSLYLHSIERPHSHQHVED
SKKDSDSGVGSDNGDKRLSATEPSDEDTVSLNVPMSNIAEEDQTTKEDACHRLAPAEGDF
QPTPSLLGDSGSSGQEREQFAGRADVLHCELMNYIKDQAEDCEELLRIEEDAHWQTEELL
NSSKDQDLDIVMIEQLREAEDLLQGPNGLTTDITERSILNLYPMCSAEALEFPDSSLNGQ
LQLERSPEREVQNDVTLQSNGSQCSPNEIREDSPSGSPTANITAPFGLKPRSVFLRPQRN
LESIDPQFTIRRKMEQMREEKELVEQLRESIEMRLKVTLHEDLGAALMDGVVLCHLANHV
RPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRKLGVPEEKLCLPHHILEEKGLVKVG
MTVQALLDVTVTKALFT
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgccgggaagcgaaccccaagctttcgcgcccgccctctcggtaaccgccctg
cacccgcatatccaccagcaccaccagcaccacggaagcacgggcagcgcgggcttcaac
ctgcccttgaaccgtggtttggagcgcgcgctagaggaggcagccaattctgggggcttg
aacctgagcgccaggaagctgaaggaatttcccaggactgcagccccgggacatgacctc
tcggacacggttcaggcagatctatctaaaaacagactggtggaagtgccaatggagctg
tgccatttcgtatcactggaaattcttaacctgtatcacaactgtatcagagtcattccc
gaggccattgttaatttgcagatgttgacccacctgaacttgagtcgaaatcagctgtct
gccctgcccgcctgcctgtgtggtctgcctctcaaagtcttaatcgcaagcaacaacaag
cttggatccctgcctgaagagataggtcagctcaaacagttaatggagttggatgtcagc
tgcaatgagatcacagccttgccccagcagataggccagctgaagtctctccgggaactg
aatgtccgaagaaattaccttaaggttttaccaccagagctagtagatctccccttggta
aagtttgacttttcctgcaacaaagtgctggtgatccccgtctgctttcgggagatgaag
caactgcaagtgctcctccttgagaacaaccccctgcagtccccgccagctcagatttgc
acgaaaggaaaagtgcacatatttaagtacctgagcatacaggcatgccagataaagaca
gccgactccctctacctgcactccatagagaggccccattcacaccagcacgtggaagac
agtaagaaggactctgactcgggggttggaagtgataatggagataagcggttatctgcc
actgagccctctgatgaggacacggttagcctcaacgtgcccatgtcgaacatcgcagag
gaagaccagaccaccaaggaggatgcgtgccatcgactcgcccccgctgaaggagacttt
cagccgacaccttcccttttgggtgacagtggcagctcaggacaagaaagagagcagttt
gctggccgtgcagatgttctacactgcgaacttatgaactatattaaggaccaggcagaa
gactgtgaagagctattacggatagaagaggatgctcactggcagacggaagaactacta
aattcatccaaagaccaggatttggatatagtgatgatcgagcagctgagagaggcagaa
gatttgctgcagggtcccaacggtctaaccacggacattacagagagaagtattttgaat
ctgtaccccatgtgctcagcagaagccttagaattccctgattcttcactcaatggtcag
ttgcagctcgagaggtctccagagcgtgaggtgcaaaatgatgtaacgttacagagtaat
ggaagccagtgttctccaaatgagataagagaggactccccttcagggtctcccactgca
aacatcacagctccatttggcctgaagcctcgttcagtgtttctaagacctcagagaaac
ttggaatctatagacccgcagtttacgattcggaggaagatggagcagatgagagaggag
aaggagctggtggagcagctccgtgagagcatcgagatgaggttgaaggtgaccctgcat
gaagacctgggggcagcactcatggatggcgtagtgctctgccacctggccaaccacgtc
cgaccgagatctgtcgccagcatccacgtcccctcacctgccgttcccaaactcagcatg
gccaagtgccggaggaatgtggaaaacttcctggaagcgtgcagaaaacttggcgttccc
gaggaaaagctctgtctgcctcatcacatccttgaagagaaaggcctggtcaaagtgggc
atgactgttcaagcgctgttggacgtcaccgtcacaaaagctctgttcacatga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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