KEGG   Rattus norvegicus (rat): 502128
Entry
502128            CDS       T01003                                 
Symbol
Pom121l2
Name
(RefSeq) POM121-like protein 2 isoform 1
  KO
K14316  nuclear pore complex protein Nup121
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03013  Nucleocytoplasmic transport
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    502128 (Pom121l2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    502128 (Pom121l2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    502128 (Pom121l2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     502128 (Pom121l2)
SSDB
Motif
Pfam: POM121
Other DBs
NCBI-GeneID: 502128
NCBI-ProteinID: NP_001156402
RGD: 1594366
Ensembl: ENSRNOG00000061510
UniProt: A6KNA7
Position
17:complement(47241917..47249231)
AA seq 917 aa
MGSYLGKAGSSPRSSAQGRADPREKPATRQPTRPLYQVHRVQHVHRAQPVRRHRPARRPP
NWDPANPAAFVSEAWRRFPMKSPQNPIMGSLPSDWWESYLKRNIWSLRHPRATWSPVTVK
ISPPERRPRPLFPASRVVNSAGPSEEPPGPCGKEQVLRALLECRKGGARWEEPLFPDSSD
TQRKSATLWSAFKPLLKSGATVSFVARPGSLKRSLHAQSSDPKCKRSSYSSVALLASIHT
RGPLSTKRNAITSSYSSSRDLSESWKRHFSRSSVQTPEWPLKKTGKSPNSHLLVTPSSSG
QINGKIPLLQSGPRHLLTMPCQQGPVVTEEDPTSEGQAVPSNQTTEATTGTATDSIPEIR
AGFQPPLSLNRPSETVLNTCVNPQLESLKNMPAPHGCSLLEHIPSISSDSKPSIASIQAL
PSSPTTPVTDSTWLSSVPQAHRSAVSPHSSVIIPTAPTTQSTLVGVVSSPVLHLPASVLP
VETSAHSALRPIWGSVHNTKVRTASYSRISVMAEASSSSSFSTTPGILRPTFKPIFGSIE
PLKTMSKTAPVSTQQPSLSLSSGSTHLFHSLATTVPCMVTSAIPASTSKDPGVDLNIVTS
TMGNSCSVPSCDTCLLGASQDFPSATDLIFPSKHPTIPTVHTVTLFSQVLTSAIKISPLR
GTDKPRRVSSPLATLDTSTNQSPVTSSISNVTSALTASLGSSPKPPFLPFQRSTCQPSPG
AIDGLKQTSLQLAPAKSFCTSFLSENSGVSPTQMLPPAQLVLSKTTWPACGGLTSSTPII
RTPTISQPGLGGNPAGSPPSKASSIALRVVRQNHQSGTYSSVFGSTAPRPFAFGGLVTSM
DCGEPEVIVTAPPRSTSGARQSMTPSTLAPFVQCWNWSMQGPPNQITPLASIPARKIMSG
APLPGSLCLEYPCTWSN
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgggcagctacctgggcaaagcagggtcctcgccgcggtcctcagcacaggggcgcgca
gacccacgggagaagcctgcgacccgccaacccactaggcccctctaccaggttcaccgt
gtgcagcatgtccaccgcgcccagcctgtccggagacacaggccggcccggaggccacca
aactgggatcccgccaaccctgccgctttcgtcagtgaggcctggaggcgctttcccatg
aagagtccacagaaccccattatgggctctcttccttcagactggtgggaaagttacctg
aagcgtaatatttggtcccttcgtcaccctcgagccacatggagtccggtgacagtcaag
atctcgcctcctgagcggagaccacggcccttgttcccagcctcaagagtggtgaactcc
gcgggaccttcagaggagccaccaggcccctgtggaaaggaacaggtgctgagggccctc
ctcgagtgcaggaagggtggagccaggtgggaagagcctctgttccctgatagctctgac
actcaaaggaagtcagccaccttatggtctgcctttaagcccctgttgaaaagtggggcc
actgtttcgtttgtggccaggcctgggtctctgaaaaggagcctccatgcccagagctca
gatcctaaatgtaagaggtccagttactcctctgtggccctcttggccagcatacatacc
agaggccccctgagcacgaaaagaaatgctattaccagctcctatagttcttctagagat
ctctcagaatcttggaaaagacatttttccaggtcatcagtccagactccagaatggcca
ttgaaaaagacaggaaaaagtcctaattctcacctcttagtcacgcccagcagctctgga
cagataaatggaaagattcctctactgcaatctggtcctaggcaccttttgactatgcct
tgccagcaaggtcctgttgtcactgaagaggacccaacatcagaggggcaagctgtgcca
agcaaccaaaccacagaagctacaactgggacagccacagactccattccagagatcagg
gctggttttcagcctcccttgtctctcaatcggccttctgagacagttcttaatacgtgc
gtgaaccctcagctggaaagcttaaagaatatgcctgccccacatgggtgctcactgtta
gagcacattccaagcatctcttcagactcaaaaccctcaattgcttccatccaggcatta
ccaagctctcccacaacaccagtcactgattccacctggctttcttcagtccctcaggct
cacaggtctgctgtgtccccacactcatctgtcattatccccacagcacccaccacacaa
agcactttggttggggtggtgagtagtccagttctccatcttcctgcatctgtacttcct
gtggagacttctgctcactcggcattaagaccgatatgggggtctgtgcacaatactaag
gttagaactgcctcatactccagaatttctgtcatggctgaggcatcttcaagctcttct
ttctccacaactccaggtatcttaaggcccaccttcaagcctatctttggcagtatagaa
ccgcttaaaactatgtccaagacagcccctgtgtctacccagcagccttctctttcactg
agttctggttctacccatcttttccacagcctagccaccacagtcccctgtatggttaca
tctgccattccagccagcacatccaaagatcctggtgtggatttgaacatagtaaccagc
accatgggcaactcttgctctgtcccttcttgcgacacttgcctacttggagcttcccag
gactttccctcagccactgatttaattttcccttccaaacaccccacgattcccactgta
cacacggtcactctctttagccaggttcttactagtgccatcaagatatcccctctcaga
ggcactgataaaccgaggagggtgagcagccctctggcaactttggacacatccacaaac
cagtctccagtgacctcaagcatctccaatgtgacttcagcactcacagcatctttgggg
tcaagcccgaagccaccttttctaccattccaaagaagtacttgtcaaccttcacctggg
gccatagatgggctaaagcaaacttctctccaactagctcctgccaaaagcttctgtacc
tctttcctttcagagaactcaggtgtgtccccaacccagatgttgccacctgctcaattg
gtccttagcaagaccacctggccagcttgtggggggctgacatcttcaactcccattatc
cgcactcctaccatcagccaaccaggtttgggcggcaatccggctgggtccccacccagc
aaagctagttcaattgcccttagggttgtcaggcagaaccaccagagtgggacctacagt
tcagtatttggtagcacagccccaagaccttttgcttttggaggattagtgacctctatg
gattgtggagagcctgaggtcattgtgactgccccaccaaggagcacttctggagcaaga
cagagtatgaccccaagcaccctagctccctttgtgcaatgctggaactggagcatgcag
ggccctcctaaccagatcacacctttggctagcattcctgcaagaaagatcatgtctggg
gcccccctccctggttccctttgcttagagtacccctgtacctggagtaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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