KEGG   Rattus norvegicus (rat): 502372
Entry
502372            CDS       T01003                                 
Symbol
Syce1
Name
(RefSeq) synaptonemal complex central element protein 1
  KO
K19534  synaptonemal complex central element protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    502372 (Syce1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Meiosis-specific proteins
   Synaptonemal complex
    502372 (Syce1)
SSDB
Motif
Pfam: SYCE1 DUF745 CCDC22_CC COG4_N Myb_DNA-bind_3 ATG14 FliJ
Other DBs
NCBI-GeneID: 502372
NCBI-ProteinID: NP_001020229
RGD: 1559853
Ensembl: ENSRNOG00000024073
UniProt: Q5XHZ2 A6HXJ5
Position
1:complement(205281808..205292811)
AA seq 329 aa
MATRPQPLSVEPEGSADLLHGPEGARGRRGSTQKIEDLMEMVEKLQKVGSLEPRIEVLIN
RINEVQQAKKKASEELGEAQTVWDTLQKEVDSLHEEKVRLKDILNRKEETLRIMQLHCQE
KESEAERKHSMLQECKDRISFLNNQIDNEKAKLRRLRLDFEEHLETLMSQHKDTMEFHKP
EHLTEEMSVLDSSKEQLLKEEKLIKAKLEDVQHRLCALCGPEGSSTFSDGLFLRSHEAAA
AMQMFKDENKKAEELLEAAAQQHQQLQQRCRQLQQKRQRLKEELEKHGVQILAQIQSTQK
EEDSSWRTASPKPLEAHKETVQERPSSRT
NT seq 990 nt   +upstreamnt  +downstreamnt
atggccaccagaccgcagccgttgagtgtggagcccgagggatcagcagacctgctccac
gggcctgagggggccagagggcggcgtggatccacacagaaaattgaagacttaatggaa
atggtggaaaagttgcagaaagtgggaagtctggagccccgcattgaggtcctgattaac
cgcattaatgaggttcagcaagcaaaaaagaaagccagtgaggagcttggagaggcccag
actgtgtgggataccctgcagaaggaagtggactcattacacgaagagaaagtacgtctg
aaggatatcttgaacagaaaggaagagaccctgaggattatgcagctgcactgtcaggag
aaggaaagcgaggcagagaggaagcacagcatgttgcaggaatgtaaagacagaatttct
ttcctgaacaatcagatcgacaatgagaaggccaaactaagacgactgaggttggatttt
gaagaacatctggagactttgatgagtcaacataaggacaccatggaatttcataagcct
gaacatctgacagaggagatgagtgttttggacagcagcaaggagcagctgctcaaggaa
gagaaactgatcaaggcaaagctggaggatgtgcagcatcggctgtgtgccctgtgtggg
cccgagggttcttccaccttctctgatggactcttcctccgaagccatgaggcagctgca
gcaatgcagatgttcaaggatgagaacaagaaagccgaggagctccttgaggctgcagcg
cagcagcaccagcagctgcagcagaggtgccgccagctgcagcagaagcggcagaggctg
aaagaagagctggaaaagcatggggtacagatccttgctcaaattcagagtacgcaaaag
gaagaggacagctcgtggaggacggccagtcctaagcccttagaagcccacaaggagaca
gtccaagagcgcccatcaagcaggacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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