KEGG   Rattus norvegicus (rat): 50687
Entry
50687             CDS       T01003                                 
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 precursor
  KO
K06550  L1 cell adhesion molecule
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
rno04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    50687 (L1cam)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    50687 (L1cam)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    50687 (L1cam)
   04090 CD molecules [BR:rno04090]
    50687 (L1cam)
   04091 Lectins [BR:rno04091]
    50687 (L1cam)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  L1 family
   50687 (L1cam)
CD molecules [BR:rno04090]
 Proteins
  50687 (L1cam)
Lectins [BR:rno04091]
 I-type lectins (Siglecs)
  50687 (L1cam)
SSDB
Motif
Pfam: Ig_3 I-set fn3 ig Ig_2 Bravo_FIGEY V-set C2-set_2 Pur_ac_phosph_N Ig_5 Ig_C17orf99
Other DBs
NCBI-GeneID: 50687
NCBI-ProteinID: NP_059041
RGD: 619777
Ensembl: ENSRNOG00000061230
UniProt: Q05695
Position
X:complement(156748597..156775116)
AA seq 1255 aa
MVMMLWYVLPLLLCSPCLLIQIPDEYKGHHVLEPPVITEQSPRRLVVFPTDDISLKCEAR
GRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNNLG
TAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQ
DERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPR
LLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLN
VGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQ
PEVTWRINGMSIEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV
VQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT
LGIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSTIEKKGARVTFTCQA
SFDPSLQASITWRGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVE
SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEK
WFSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGSGEPSPVSETVVTPEAAPEKNPVDV
RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPLGKQETWKEQTVSDPFLVVSNTSTF
VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQV
KGHLRGYNVTYWWKGSQRKHSKRHVHKSHMVVPANTTSAILSGLRPYSSYHVEVQAFNGR
GLGPASEWTFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYLLSYHPLDGE
SKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPGEAIVREGGTMALFGKPDFG
NISVTAGENYSVVSWVPREGQCNFRFHILFKALPEGKVSPDHQPQPQYVSYNQSSYTQWD
LQPDTKYEIHLMREKVLLHHLAVKTNGTGPVRVSTTGSFASEGWFIAFVSAIILLLLILL
ILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDIKPL
GSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq 3768 nt   +upstreamnt  +downstreamnt
atggtcatgatgctgtggtacgtgttgcctcttctcctctgcagcccctgcctgctcata
cagattcctgatgaatataaaggacaccatgtactggagccacctgtcatcacagaacag
tctccacggcgcctggttgtcttcccaacagatgacataagcctcaaatgtgaagccaga
ggcagaccccaagtggagttccgctggacgaaagatggcatccacttcaaacctaaggaa
gaattgggtgtagtggtacacgaggcaccctattctggctccttcaccatcgaaggcaac
aacagctttgcccagaggtttcagggcatctatcgctgctatgccagcaataatctagga
actgccatgtcgcatgagatccagctcgtggctgagggtgcccccaaatggccgaaggag
actgtaaaacccgtggaagtggaggaaggagaatcagtagttctaccttgcaatcctcca
cccagtgcagccccacttaggatctactggatgaacagcaagattttgcacatcaaacaa
gatgagcgggtgtccatgggccagaacggagacctatattttgccaatgtgcttacctca
gacaatcattcagactacatctgcaatgcccacttccctggcacccggaccatcattcaa
aaggaacctattgacctccgggtcaagcccaccaacagcatgattgaccggaagccacgc
ctgctcttccccacaaactccagcagtcacctcgtggccttgcagggccagtcattaatc
ctggagtgcattgctgagggattccctacacccaccatcaagtggctgcaccccagtgac
cctatgccaacagaccgtgttatctaccagaaccataacaagacactgcagctcctcaat
gtgggcgaggaagatgatggcgagtatacctgccttgctgagaactcactgggcagtgct
cggcatgcctactatgtcactgtggaagctgccccatactggctgcagaagccccagagt
catttgtatgggccaggagagactgcccgcctagactgccaagtccagggcaggccccaa
ccagaggtcacctggagaatcaacggaatgtctatagagaaggtgaacaaggaccagaag
taccggattgagcaggggtctttgatcctgagtaatgtgcaaccaagtgacacaatggtg
acccagtgtgaagctcgcaaccagcatgggctcctactagccaatgcctatatctatgtt
gtccagctgccagccaggatcctaacaaaagacaatcagacatacatggcagtagagggc
agtactgcttacttgctgtgcaaagcctttggagctcctgttcccagtgtccagtggctg
gatgaggaaggaaccacagtgcttcaggatgaaagatttttcccctatgccaatggaacg
ctgggcatcagagatctccaggccaatgacactggacgctatttctgccaggctgccaat
gaccagaacaatgtgaccattttggctaacctacaggttaaagaagcaacccagatcaca
caaggaccccggagcacaattgagaagaaaggtgcaagggtgacattcacgtgccaggcc
tcctttgacccctctttacaagccagcatcacttggcgtggagatgggagagacctccag
gaacgtggagacagtgacaagtatttcatagaagatgggcaacttgtcatccagagcctg
gactacagtgaccagggcaactacagttgtgtggccagcactgaactggatgaggtggag
agcagggcacaactcttagtggtgggaagccctgggccagtgcctcacctggagctgtcc
gaccgccacttgctgaagcagagccaggtgcacttgtcttggagccctgctgaagaccac
aactctcccattgagaaatatgacattgaatttgaggacaaggaaatggctcctgagaaa
tggttcagtctaggcaaggtgccaggaaatcagacctctactaccctcaagctgtccccc
tatgtccactatacctttcgggtcactgccattaacaaatatggttccggagaacccagc
cctgtctctgagactgtagtcacacctgaggcagccccagagaagaaccctgtggatgtg
agaggggaaggaaatgagaccaacaatatggtcatcacatggaagccccttcggtggatg
gattggaatgccccccagattcagtaccgtgtacagtggcgaccactgggcaaacaagag
acctggaaggaacagaccgtgagcgaccccttcctggtggtgtctaacacttccacattt
gtgccttatgagatcaaagtccaggcagtgaacaaccaggggaagggccctgagccccag
gtcaccattggctattcaggggaagactacccccaggtgagccctgagcttgaagacatc
acaatcttcaactcaagcactgtgctggtcaggtggaggcctgtggacttggcccaggtt
aagggccacctcaggggatacaatgtaacgtactggtggaagggcagtcagagaaagcac
agcaagaggcatgtccacaaaagtcacatggtggtacctgcgaacaccaccagtgccatc
ctcagtggtttgcgtccttacagctcttatcatgtggaggtacaggcctttaatgggcgg
ggcttagggcctgcaagtgaatggaccttcagcaccccagagggagtgcctggccaccct
gaggcattacatctggagtgccagtcggacactagcctgctactgcactggcagccacca
ctcagccacaatggagtgctcactggctacctgctctcttaccatcccttggatggggaa
agcaaagagcagttgttcttcaacctttcggacccagagctccggactcataatctcacc
aacctcaaccctgatctacagtaccgcttccagcttcaggccaccacccagcagggtcct
ggtgaggccattgtgcgtgaaggaggcactatggccctatttggcaagccagattttggc
aacatttcagtcacagcaggtgaaaactacagtgtggtctcctgggtccctcgggagggc
cagtgcaatttcaggttccacatcctgttcaaagccttgccagaagggaaagtgagccct
gatcaccagcctcagcctcaatatgtgagctacaatcagagctcctacacacagtgggac
ctacagcctgacaccaaatatgagatccacctgatgagggagaaggtcctcttgcaccat
ctggctgtgaagactaatggcactggccccgtgcgagtttctactacaggtagctttgcc
tccgagggctggttcatcgcctttgtcagtgctatcattctcttgctcctcatcctgctc
atcctctgcttcatcaaacgcagcaagggcggcaaatattcagtgaaggacaaggaggac
actcaggtagattccgaggcccggcccatgaaagacgagaccttcggcgagtacagtgac
aatgaagagaaggccttcggcagcagccagccatctctcaatggagacatcaaaccccta
ggcagtgatgacagtctggctgattatgggggcagtgtggatgtccagttcaatgaggat
ggctctttcatcggccaatacagtggcaaaaaagagaaggaggcagcgggaggcaatgac
agctcaggggctacctctcctatcaatcctgcagtagccctagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (35)   

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