KEGG   Rattus norvegicus (rat): 54190
Entry
54190             CDS       T01003                                 
Symbol
Rabep1
Name
(RefSeq) rab GTPase-binding effector protein 1
  KO
K12480  Rab GTPase-binding effector protein 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    54190 (Rabep1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    54190 (Rabep1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    54190 (Rabep1)
 Protein recycling
   Rab4 associated proteins
    54190 (Rabep1)
SSDB
Motif
Pfam: Rabaptin Rab5-bind Fez1 Cep57_MT_bd
Other DBs
NCBI-GeneID: 54190
NCBI-ProteinID: NP_061997
RGD: 708568
Ensembl: ENSRNOG00000005015
UniProt: O35550
Position
10:56064742..56168778
AA seq 862 aa
MAQPGPAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQ
NAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAV
MKETVRDYEHQFHLRLEQERAQWAQYRESADREIADLRRRLSEGQEEENLENEMKKAQED
AEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAV
LNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR
MEIVLTSEQLRQVEELKKKDQEEDEQQRINKGKDNKKIDTEEEVKIPVVCALTQEESSTP
LSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDNDMFKEGLRRAQSTDSLGTSSSLQSK
ALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTVSLGSLQMPSGFMLTKDQERAIKAMT
PEQEETASLLSSVTQGMESAYVSPSGYLLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYE
KQLQGIQIQEAETRDQVKKLQLMLRQANDQLEKTMKEKQELEDFLRQSAEDSSHQISALV
LRAQASEVLLEELQQSFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHV
SLQLAEDFILPDTVQVLRELVLKYRENIVHVRTAADHMEEKLKAEILFLKEQIQAEQCLK
ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEIKVNLE
EQLKKETAAKATVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS
LERIRAILNDTKLTDINQLPET
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggcgcagccgggcccggctccccagcctgacgtttctcttcagcaacgggtagcagaa
ttggaaaaaattaatgcagaatttttacgtgcacagcagcagcttgagcaagaatttaat
caaaagagagcaaaatttaaggagctgtatttggctaaagaggaggatctgaagcggcaa
aatgcagtattgcaagctgcgcaggatgacttgggtcaccttcggacacagctgtgggag
gcgcaggcagaaatggagaatatcaaggcgatcgccacagtctctgagaacactaagcaa
gaagctatagatgaagttaaaaggcagtggagagaagaagttgcttcacttcaggctgta
atgaaagagactgtgcgtgactatgagcatcagtttcacctgaggctggagcaggaacga
gcgcagtgggcacagtatcgagagtctgcagaccgggagatagctgacctaagaagaagg
ttgtctgaaggtcaagaggaagaaaatttagaaaatgaaatgaaaaaggcccaagaggat
gccgagaagcttcgctctgtcgtgatgcccatggagaaggaaattgcagccctgaaagat
aaactgacagaagctgaagacaagattaaagagctggaggcctcaaaggttaaggaactg
aatcattatctggaggccgagaagtcttgcaggactgatctggagatgtatgtagctgtt
ttgaacacccagaaatctgttctacaggaagatgctgagaaattgaggaaagaactgcat
gaagtttgccatctcttggagcaagagcgacaacaacacaaccagttaaaacacacgtgg
cagaaggccaacgaccagtttttggaatctcagcgcttgctgatgagagacatgcagcga
atggagatcgtgttaacttcagaacagctacgacaagttgaagaactgaagaagaaagat
caggaggaggatgaacaacaaaggatcaataagggaaaagataacaagaaaatagacact
gaagaagaagtaaaaataccagtagtatgtgctttaactcaagaagaatcttcaacccca
ctatcaaatgaagaggagcatttagacagcacccatgggtcagtccattccttagatgca
gacttgctgttaccatctggagatccattcagtaaatcggacaatgacatgtttaaagag
ggactccggagagctcagtctacagacagcttgggaacctcaagctcattgcaatccaaa
gctttaggctataactacaaagcaaaatctgctggaaatttggatgagtcggattttgga
ccactggttggagcagattctgtgtctgagaactttgatactgtgtcccttgggtcactg
cagatgccaagtggatttatgttaaccaaagatcaagaaagagcaattaaggcaatgaca
cctgaacaggaggagacagcatccctcctctcaagtgtcacacagggtatggagagtgca
tatgtctctcctagtggttacctcttagtgagtgaaacggaatggaatctcctgcagaaa
gaggtacataatgctggaaataagcttggtagacgttgtgatatgtgttccaattatgaa
aaacagttacaaggaattcagattcaggaagctgagacaagagaccaggtgaaaaaactg
cagttaatgctcaggcaagctaatgaccagctagagaagacaatgaaagagaaacaggag
ctagaggacttcctcaggcagagtgccgaggactcaagccaccagatatctgcacttgtt
ttaagagcccaagcctctgaggtattacttgaagagttacaacagagtttttcccaagca
aagagggatgttcaggagcagatggcagtgctgatgcagtcacgtgaacaggtctcagaa
gagctggtgaggttacagaaagacaatgacagcctccagggaaagcatagcttgcatgtg
tcattacaactagcagaagacttcattcttccagatactgtgcaggtgctccgggaactg
gttttaaaatatcgtgagaacattgttcatgtgcggacagcagcagaccacatggaagag
aagctgaaggctgaaatactttttctaaaagagcaaattcaggcggaacagtgtttaaaa
gaaaaccttgaagagacattacagctggaaattgaaaactgcaaggaggaaatagcttcc
atttctagtctaaaagctgaattagaaagaataaaagttgaaaagggacagttggaatct
acattaagagagaagtcgcaacaacttgagagcctccaagaaataaaagttaatttagag
gaacagttaaagaaggaaactgctgctaaggccactgttgaacagctcatgtttgaagag
aagaacaaagctcagaggttgcagacagaattagatgtcagtgaacaagtccagagagat
tttgtaaaactttctcagactcttcaggtgcagttagagaggatccggcaagcagactcc
ctggagaggatccgggcaattctgaatgataccaaactgacagacattaaccagctccct
gagacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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