KEGG   Rattus norvegicus (rat): 54227
Entry
54227             CDS       T01003                                 
Symbol
Arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04530  Tight junction
rno04666  Fc gamma R-mediated phagocytosis
rno04810  Regulation of actin cytoskeleton
rno05100  Bacterial invasion of epithelial cells
rno05132  Salmonella infection
rno05135  Yersinia infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    54227 (Arpc1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    54227 (Arpc1b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    54227 (Arpc1b)
 09150 Organismal Systems
  09151 Immune system
   04666 Fc gamma R-mediated phagocytosis
    54227 (Arpc1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    54227 (Arpc1b)
   05135 Yersinia infection
    54227 (Arpc1b)
   05100 Bacterial invasion of epithelial cells
    54227 (Arpc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    54227 (Arpc1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    54227 (Arpc1b)
Membrane trafficking [BR:rno04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    54227 (Arpc1b)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     54227 (Arpc1b)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N Rax2
Other DBs
NCBI-GeneID: 54227
NCBI-ProteinID: NP_062162
RGD: 2155
Ensembl: ENSRNOG00000000991
Vega: OTTRNOG00000000692
UniProt: O88656 A6K1G1
Position
12:complement(14595939..14609501)
AA seq 372 aa
MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHGVCFSAGGSRVAWVSHDSTVCLVDAEKKMAVATL
ASETLPLLAITFITENSLVAAGHDCFPVLFTYDNAAGTLSFGGRLDVPKQNSQRGLTARE
RFQNLDKKASSEGGAATGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVK
SLESALKDLKIR
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcttaccacagcttcctggtggaacccatcagctgccatgcctggaacaaggaccgt
actcagatcgccatctgccccaacaaccacgaggtgcacatctacgagaagagcggtgcc
aagtggaacaaggtgcacgagctcaaggagcacaacgggcaggtgacaggcatcgactgg
gcccccgagagtaaccgcattgtgacctgcggcacagaccgcaatgcctatgtgtggacg
ctgaagggccgcacgtggaagcccacgctggtcatccttcggattaatcgagctgcccgc
tgcgtgcgctgggcccccaatgagaacaagttcgccgtgggcagtggctcccgtgtcatt
tccatctgttattttgagcaggagaatgactggtgggtgtgcaaacacatcaaaaagccc
atccgctccactgtccttagcctggactggcaccccaacaacgtgctcctggctgcaggc
tcctgtgacttcaagtgcaggatcttctctgcctatatcaaggaggtggaggaacggcca
gcccctacaccgtggggctccaagatgccctttggggagctgatgtttgaatcgagcagc
agctgtggctgggtgcatggtgtctgcttctcggccggtgggagccgagttgcttgggtc
agccatgacagcactgtgtgcctggtagatgctgagaagaagatggccgtggcaaccctg
gcctctgagacattaccgctcctggccatcaccttcatcacagaaaatagtctcgtggca
gcgggccacgactgcttcccggtgctgtttacctatgacaacgctgcggggacattgagc
tttggtggccggctggatgtgcccaagcagaactcccagcgtggcctgacagcccgagag
cgcttccagaacctcgacaagaaggccagctctgaagggggtgcagccacaggggctggc
ctggattcactgcacaagaacagcgtcagtcaaatctcggtgctcagcgggggcaaggcc
aagtgctcgcagttctgcaccacaggcatggacggtggcatgagcatctgggatgtgaag
agcttggagtcagccttgaaggacctgaagatcagatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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