KEGG   Rattus norvegicus (rat): 54234
Entry
54234             CDS       T01003                                 
Symbol
Cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E
  KO
K04852  voltage-dependent calcium channel R type alpha-1E
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04020  Calcium signaling pathway
rno04930  Type II diabetes mellitus
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    54234 (Cacna1e)
   04020 Calcium signaling pathway
    54234 (Cacna1e)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    54234 (Cacna1e)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    54234 (Cacna1e)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   54234 (Cacna1e)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel
Other DBs
NCBI-GeneID: 54234
NCBI-ProteinID: NP_062167
RGD: 2246
Ensembl: ENSRNOG00000002863
UniProt: Q923K6
Position
13:complement(69125048..69613795)
AA seq 2296 aa
MARFGEAVVVGRPGSGDGDSDQSRNRQGTPVPASGPAAAYKQSKAQRARTMALYNPIPVR
QNCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTP
MSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTH
FNTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAV
LTVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERE
RVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNSGTSALEVLRRATIKRSR
TEAMTRDSSDEHCVDISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFY
WIVLSVVALNTACVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSS
FNCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSS
MKSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDW
NEVMYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEE
EEAFNQKHALQKAKEVSPMSAPNMPSIERERRRRHHMSVWEQRTSQLRRHMQMSSQEALN
KEEAPPMNPLNPLNPLSPLNPLNAHPSLYRRPRPIEGLALGLGLEKCEEERISRGGSLKG
DIGGLTSVLDNQRSPLSLGKREPPWLPRSCHGNCDPTQQETGGGETVVTFEDRARHRQSQ
RRSRHRRVRTEGKESASASRSRSASQERSLDEGVSIDGEKEHEPQSSHRSKEPTIHEEER
TQDLRRTNSLMVPRGSGLVGALDEAETPLVQPQPELEVGKDAALTEQEAEGSSEQALLAD
VQLDVGRGISQSEPDLSCMTTNMDKATTESTSVTVAIPDMDPLVDSTVVNISNKTDGEAS
PLKEAETKEEEEEVEKKKQKKEKRETGKAMVPHSSMFIFSTTNPIRKACHYIVNLRYFEM
CILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSY
FRDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKA
VFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHE
KNKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRM
EMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLT
RYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAF
TMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLKL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEE
SHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTTAPSGQNESERCGTD
LAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACG
RIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTAL
DIKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMPKASDLTVGKIYAAMMIMDY
YKQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQDPVSGLSGRSGYPS
MSPLSPQEIFQLACMDPADDGQFQEQQSLEPEVSELKSVQSSNHGIYLPPDTQEHAGSGR
ASSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFSMERSSENTYKSRRRSYHSS
LRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEERGTQADWESPERR
QSRSPSEGRSQTPNRQGTGSLSESSIPSISDTSTPRRSRRQLPPVPPKPRPLLSYSSLMR
HTGGISPPPDGSEGGSPLASQALESNSACLTESSNSLHPQQGQHPSPQHYISEPYLALHE
DSHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHYRRRRRGGPGPGMMC
GAVSDLLSDTEEDDKC
NT seq 6891 nt   +upstreamnt  +downstreamnt
atggctcgcttcggggaggcggtggtcgttggcagaccaggctcaggcgatggagactcg
gaccagagcaggaaccgacaaggaacccccgtaccggcctcggggccggcggccgcctac
aagcagtcaaaagcgcagagggcgcggactatggctttgtacaaccccataccagtccgg
cagaactgtttcacggtcaacagatccctgttcatcttcggagaagataacattgtcagg
aaatatgccaagaagctcatcgattggccgccatttgagtacatgatcctggccaccatc
attgccaactgcatcgtcttggccctggagcagcatcttcctgaggatgacaagacccca
atgtcccgaagactggagaagacagaaccatattttattggaatcttctgctttgaagct
gggatcaaaatcgtggctctaggattcatcttccataagggttcgtacctccgtaacggc
tggaatgtcatggacttcattgtggtcctcagtggcatcctggccactgcaggaacccat
ttcaacacccacgtggacctgcggaccctccgggctgtgcgtgtcctgaggcccttaaag
ctcgtgtcaggaatacctagcctgcagatcgtgctgaagtccatcatgaaggccatggtg
cctcttctgcagattggccttctgctcttctttgccattctcatgtttgccatcattggc
ttggagttctacagtggcaagttgcatcgagcatgcttcatgaacaattcaggtattcta
gagggatttgatcctcctcacccgtgtggtgtacagggctgcccggctggttatgaatgt
aaggactggatcggccccaatgacgggatcacccagtttgacaacatcctttttgctgtg
ctgactgtcttccaatgcatcactatggaagggtggaccactgtgctgtacaataccaat
gatgccttaggagccacctggaactggctgtacttcatccccctcatcatcatcggatcc
ttctttgttctcaaccttgtcctgggcgtgctttccggggaatttgccaaagaaagagag
agagtggagaaccgaagagcattcatgaagctccggcgtcagcaacagattgagcgcgag
ttgaatggctaccgcgcctggatagacaaagcagaggaagtcatgcttgctgaagaaaat
aaaaactcgggaacatcagccttggaagtgcttcgaagggcaaccatcaaaaggagccgg
acggaggccatgacccgagactccagcgatgagcactgcgttgatatctcttcagtgggc
acacctcttgccagagccagtatcaagagcacaaaagtagatggagcctcctatttccgg
cacaaggaacggcttctgcgtatctctatccgacacatggtcaagtcgcaagtgttctac
tggatcgtcctgagtgttgtggctctcaatactgcctgtgtggccatcgttcatcacaac
cagccacagtggctcactcacctcctctactatgcagaatttttgtttctgggactcttc
ctgttggagatgtccctgaagatgtatggcatggggccacgcctttattttcactcatcc
ttcaactgctttgattttggggtcacagtgggcagcatctttgaggtcgtttgggcaatc
ttccgacctggcacatcttttggaatcagtgtcttacgagctctccggctcctaaggata
tttaaaataaccaagtattgggcatccctccggaatctggttgtttccttgatgagctcc
atgaagtctatcatcagcttactcttcctcctcttcctcttcattgttgtctttgctctc
ctgggaatgcagctctttggaggcaggtttaactttaatgatgggactccttcggctaat
tttgataccttccctgcagctatcatgacagtgttccagatcctgacgggggaagactgg
aatgaagtgatgtataacggcatccgctcccagggtggggtgagctcaggcatgtggtct
gccatctacttcattgtgctcaccttgtttggaaactacacactgctgaatgtattcttg
gctatcgctgtggacaatctcgccaatgcccaggaactgaccaaggatgagcaggaggaa
gaagaagccttcaaccagaaacatgcactgcagaaggccaaggaggtcagcccgatgtct
gctcccaacatgccttccattgagagggagaggagacgccgacaccacatgtctgtgtgg
gaacagcgcaccagccagctgaggaggcacatgcaaatgtctagccaagaagccctcaac
aaagaggaggccccaccaatgaaccccctcaatccactcaacccactgagtcctctcaac
ccactcaatgctcatcctagcctctatcggaggcccaggcccattgagggcctagccctg
ggcttgggtcttgaaaaatgtgaagaggagcgtatcagccgtggaggttctctcaagggg
gacataggtggcctgactagcgtcctggacaaccagaggagccctttgtccctgggcaaa
cgggagccaccgtggctgcccagatcctgtcatggaaactgtgacccaacccagcaggag
actgggggaggagagactgtggtgacttttgaggaccgggccaggcacaggcagagtcag
aggcgaagccggcatcgccgagtcaggactgagggcaaggagtctgcctctgcctccaga
agcaggtctgccagccaggagcggagtctggatgaaggggtgtccatcgatggggagaag
gaacacgagcctcagagcagccacaggagcaaggagccaaccatccatgaagaagagaga
actcaggacttaaggaggaccaacagtctgatggtccccaggggctcaggactggtagga
gctcttgatgaggcagaaacacctctagtccagccccaacctgagctggaagtggggaag
gatgcagctctgacagagcaggaggctgaaggcagcagcgagcaagccctgcttgcggat
gtacagctggatgtgggccggggcattagccagagtgaacctgacctctcctgcatgaca
accaacatggacaaggctaccactgagagcaccagtgtcacagtcgccatccctgacatg
gaccccttggtggactcaacagtggtgaacattagcaacaagacggatggagaagccagt
cccttgaaggaagcagagaccaaagaggaagaggaagaggtggaaaagaagaagcagaag
aaggagaagcgggagactggaaaagccatggtgccccatagctctatgttcatcttcagc
accactaacccgatccgcaaggcttgccactacattgtgaatctacgctactttgagatg
tgcattctcttggtgattgcggccagcagcattgccctggcagctgaggaccctgtacta
actaactcagagcgtaacaaagtcctgagatatttcgactatgttttcacaggagtgttt
acctttgagatggtgataaagatgatagaccaaggcttgatcctgcaggatggatcgtac
ttccgagacctctggaatatcctggactttgtggtagtggttggtgcattggtagcattt
gctctggcgaacgctttgggaaccaacaaggggcgggatatcaagacgatcaagtctctg
agggtacttcgagttctgcgaccactgaaaaccatcaagcgcttgcccaaactgaaggct
gtgtttgactgcgtggtgacctccttgaagaatgtcttcaacatactcattgtctacaag
ctctttatgttcatctttgccgtcattgctgttcagttattcaagggaaagttcttttat
tgcaccgacagttccaaggacacagagaaggaatgcataggcaactatgtagaccacgag
aaaaacaagatggaggtgaagggccgggagtggaagcgtcatgaattccactatgacaac
atcatctgggccctgctgaccctcttcaccgtctccacgggggaaggatggcctcaggtt
ctgcagcactcggtagatgtgacagaggaggacagaggcccaagccgcagcaaccgcatg
gagatgtccatcttctatgtggtctactttgtggtcttccctttcttctttgtcaatatc
ttcgtggccctcattatcatcaccttccaggagcaaggggacaagatgatggaggagtgt
agcctagaaaagaatgagcgggcatgcatcgacttcgccattagtgccaaacctctcacc
cgctacatgccacaaaacaggcacaccttccagtaccgcgtgtggcacttcgtagtctcg
ccatcctttgagtataccatcatggccatgattgccttgaacaccgttgtgctgatgatg
aagtactattctgctccttggacctatgagctcgccctaaagtacctgaacatcgccttc
actatggtgttttccctagaatgtgtcctaaaggtcatcgctttcggcttcttgaactat
ttccgagatacctggaacatctttgacttcattaccgtgatcggcagtatcacagaaatt
atcctgacagacagcaagctggtgaacaccagtggcttcaatatgagctttctgaagctc
ttccgagctgcacggctcataaagcttctgcgacagggctacaccatccgcatcttactg
tggaccttcgtgcagtcctttaaggctctcccctatgtctgccttctgattgccatgctt
ttcttcatctacgctatcattgggatgcaggtgtttggaaacataaagttagatgaggag
agtcatatcaaccggcacaacaactttcggagtttcttcgggtctctcatgctgcttttc
aggagcgccacaggggaggcttggcaggagattatgttgtcatgtctgggcgagaagggc
tgtgagcctgacaccactgcaccctcagggcagaacgagagtgagcgctgtggcactgac
ctggcctacgtttattttgtctccttcatcttcttctgctccttcctgatgctcaacctg
tttgtggctgttatcatggacaactttgagtacctgactcgagattcgtccatcctgggg
cctcaccacttggatgaatttgtccgtgtctgggcagagtatgacagagcagcatgtggc
cgcatccattacactgagatgtatgaaatgctgactctcatgtcaccaccgctaggcctc
ggcaagagatgtccctccaaagtggcctataagaggttggtcctgatgaatatgccagtg
gctgaggacatgacagtccatttcacctccacacttatggctctgatccggacagctctg
gacattaaaatcgccaaaggtggtgcagacagacagcagctagactcagagctacaaaaa
gagaccctggccatttggcctcacctgtcccaaaagatgttggatctgctagtgcccatg
cccaaagcctctgacctgactgtgggcaagatctatgcagcaatgatgattatggactac
tataaacagagtaaggtaaagaaacagagacagcagctggaagaacagaaaaatgcaccc
atgttccagcgcatggagccctcctcactgcctcaggagatcatttctaatgccaaagcc
ctgccttatctccagcaggaccctgtttctggcctgagtggtcggagtggatacccttca
atgagtccactctcccctcaagaaatattccagttggcttgtatggacccagcggatgat
ggacaattccaggaacagcaatcgctggagccagaggttagtgaattaaaaagtgtgcag
tcctctaaccatggcatctaccttcctccggacacccaggagcatgcgggatctgggagg
gcatcctctatgccacgtctgactatggatccccaggtggtaacagaccctagctctatg
cgacgttcattttctacaattcgggataagcgttcaaattcctcctggttggaggagttc
tccatggaacgtagcagtgaaaacacctacaagtcacgacgcagaagttaccattcctcc
ctgaggctgtcagcccaccgcctgaattctgactctggtcacaagtctgacactcaccgc
tcaggaggcagggagagaggccgatccaaagaacgaaagcatctcctctctccggatgtc
tcccgctgcaattctgaggagcgaggaacccaggctgactgggagtccccagaacgtcgc
cagtccaggtcacccagtgagggaaggtcacaaacccccaacagacagggtacaggttca
ctgagtgagagctccattccctctatctccgacaccagcaccccaagacgaagtcgtcgc
cagctcccacctgtgccaccaaagcctcggcccctcctctcctacagctccctgatgaga
cacactggcggcatctctccacctcctgatggaagtgagggtggatccccactggcctct
caagctctggaaagcaacagcgcttgcctaaccgagtcttccaactccttgcacccccag
cagggccagcacccttccccacagcactacatctctgagccctatctggccctccatgaa
gactcccacgcctcagactgtggcgaggaggagacactcacctttgaggcagccgtagct
actagcttgggccggtccaataccattggctctgccccacccctacggcacagctggcag
atgcctaatgggcactatcggcggcggaggcgtggggggcctgggcctggcatgatgtgt
ggagctgtcagtgacctcctgagtgacacggaagaagacgataagtgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (1)   
   RefSeq(pep) (15)   
DNA sequence (25)   
   RefSeq(nuc) (15)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (57)   

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