KEGG   Rattus norvegicus (rat): 54279
Entry
54279             CDS       T01003                                 
Symbol
Cntn3
Name
(RefSeq) contactin-3 precursor
  KO
K06761  contactin 3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    54279 (Cntn3)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  Contactins
   54279 (Cntn3)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set Ig_5 Pur_ac_phosph_N Tissue_fac fn3_2 NAGLU_N
Other DBs
NCBI-GeneID: 54279
NCBI-ProteinID: NP_062202
RGD: 3253
Ensembl: ENSRNOG00000006144
UniProt: Q62682
Position
4:complement(136397575..136770765)
AA seq 1028 aa
MMLSWKQLILLSFIGCLAGELLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHY
RWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAY
LENFKSRMRSRVSVREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGH
LYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIELQFPETLPAA
KGSTVKLECFALGNPVPQINWRRSDGMPFPTKIKLRKFNGVLEIPNFQQEDTGSYECIAE
NSRGKNVARGRLTYYAKPYWVQLLKDVETAVEDSLYWECRASGKPKPSYRWLKNGDALVL
EERIQIENGALTIANLNVSDSGMFQCIAENKHGLIYSSAELKVLASAPDFSRNPMKKMIQ
VQVGSLVILDCKPSASPRALSFWKKGDTVVREQARISLLNDGGLKIMNVTKADAGIYTCI
AENQFGKANGTTQLVVTEPTRIILAPSNMDVAVGESIILPCQVQHDPLLDIMFAWYFNGT
LTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGP
PENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQNVRTVPEAIDGKTRTA
TVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAAPEVAPSEVSGGGGSRSELVIT
WDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNESIVPFSPYEVKVGV
YNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKSSNGRLLGYEV
RYWNNGGEEESSSKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNTAGAGPFSATVNATTKK
TPPSQPPGNVVWNATDTKVLLNWEQVKALENESEVTGYKVFYRTSSQNNVQVLNTNKTSA
ELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISDIHPVSGYISVLL
FFIVNALW
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgatgttgtcatggaaacagttgatcctgctttcattcattggctgcctggcaggtgag
cttcttttgcaaggccccgtgtttgtcaaagagcccagcaacagtattttccctgttggc
tcggaggataaaaaaataacattaaattgtgaagcaagaggcaacccttctcctcattac
aggtggcagctgaatggcagtgacattgatacaagtctggaccatcgttacaaactgaac
ggaggaaatctcatagttattaaccctaacagaaattgggatactggaagttaccagtgt
tttgcaacaaattctcttggaacaatagtcagcagagaagctaaactccaatttgcctat
cttgaaaattttaagagcagaatgagaagcagagtgtcagttcgtgaaggccagggagtg
gtacttctctgtggacccccaccacactccggggaactttcatatgcttgggtcttcaat
gagtatccatcattcgttgaagaagacagtcgaagatttgtctctcaagagacaggacac
ctctacatagctaaagtggagccatctgatgtgggaaattacacatgcgtggtgaccagc
actgtgacaaatgccagagtattgggctccccaacccctttggtgctacgctctgatggt
gtcatgggtgaatatgaacctaaaatagaactccagtttccagaaactcttccagcagct
aaaggttcaactgtgaagttggaatgcttcgccctagggaaccctgttcctcagattaat
tggagaagaagtgatgggatgccgtttcccaccaaaattaagctgaggaagttcaatggt
gtgctcgaaattccaaacttccaacaggaagatacaggctcctatgagtgcattgctgaa
aattcacgaggaaagaatgtggcgagaggacggctcacttactatgcaaaaccttattgg
gttcaactcttaaaagatgtggaaactgctgtggaggacagtctttattgggaatgccgg
gcaagtgggaagcctaaaccctcctatcgatggctgaaaaatggagatgccttagtacta
gaggagagaatacagatagaaaatggtgcccttacaatagccaacctcaatgtgagtgac
tctggaatgttccagtgtatagcagagaacaagcatggcctcatctactccagtgctgag
ctcaaagtattagcttctgctccagatttttcaaggaaccctatgaaaaaaatgattcag
gtgcaggtgggcagcctggtgatcttggattgtaaacccagcgcctctccaagggcactt
tctttctggaagaagggagacacggtggtgcgggagcaggcaaggatttctcttttaaat
gatggaggactcaaaattatgaacgtgaccaaggctgatgctggaatctacacctgcata
gcagaaaaccagtttggcaaagcgaatggcaccacccagttggttgtgacagaaccaaca
agaataattttggcaccttctaacatggatgttgccgttggtgagagcatcattttacct
tgccaggttcaacatgaccccctattagacataatgtttgcctggtatttcaatggaact
cttacagactttaagaaagatggatcgcactttgagaaagttggtgggagttcgtcaggt
gatttaatgatcagaaacattcaactgaaacacagtggaaagtatgtatgtatggtgcag
acaggggtggacagcgtttcatctgcagctgagctcatagtgagaggttcacctggacca
ccggaaaacgtgaaagtagatgaaattacagacacaacagcccagctctcttggacggaa
ggcaccgacagtcacagcccagttatatcgtatgcagtccaggctaggacacctttctct
gtgggctggcaaaatgtcagaacagtacctgaggccattgatggaaaaacacgaacagct
actgttgtggagttaaacccatgggtggaatatgaatttcgcgttgtagccagtaacaaa
atcggaggcggagaacccagtttaccctcagaaaaagtaaggactgaagaggcagctcca
gaagtcgcaccttctgaggtgagcggaggaggtggaagccgatctgagctagtgataacc
tgggatccagtccctgaagaactccagaatggaggaggttttgggtatgtggttgctttt
cgcccacttggggttaccacctggatccagacagtggtgacatccccagataatccaaga
tacgtctttaggaatgaaagcatcgtgcctttttcgccatatgaagttaaagtgggcgtt
tacaataacaaaggtgaaggaccctttagcccagtcacaactgtgttctccgcagaggaa
gagcctacagtcgccccatctcacatctctgcacatagtctgtcctcctcagaaattgaa
gtttcatggaacacaattccctggaagtcgagcaatggacgtttacttggctatgaggtg
cggtactggaacaatggaggagaagaagaatcatccagcaaagtgaaagtggcaggaaat
cagacatcagctgtgctccgaggcctgaaaagcaacctggcatattacacagccgtccgg
gcttacaacaccgcaggcgctggtcccttcagtgccacagttaacgcgaccaccaagaaa
acccctcccagtcagccaccaggaaatgttgtttggaatgctacagacactaaagtgctg
cttaactgggaacaagtgaaagccttggagaatgaatcagaagtaacaggctacaaggtt
ttctataggactagcagtcaaaataatgtgcaagtactgaacacaaacaaaacttcagct
gaactgttgctgcctatcaaggaagactacatcattgaagtcaaggccaccacagatgga
ggggacggcaccagtagtgagcagatcaggattccaagaataaccagtatggatgcaaga
ggatccacttcagccatttctgacatccaccctgtgtcaggttacatatccgtcctactg
ttctttattgtaaatgctttgtggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (40)   

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